To cite package ‘orthos’ in publications use:

Papasaikas P, Soneson C, Stadler M (2026). orthos: 'orthos' is an R package for variance decomposition using conditional variational auto-encoders. R package version 1.11.0, https://bioconductor.org/packages/orthos.

Corresponding BibTeX entry:

  @Manual{,
    title = {orthos: `orthos` is an R package for variance
      decomposition using conditional variational auto-encoders},
    author = {Panagiotis Papasaikas and Charlotte Soneson and Michael
      Stadler},
    year = {2026},
    note = {R package version 1.11.0},
    url = {https://bioconductor.org/packages/orthos},
  }