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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "oposSOM" in publications use:'
type: software
title: 'oposSOM: Comprehensive analysis of transcriptome data'
version: 2.23.0
abstract: This package translates microarray expression data into metadata of reduced
  dimension. It provides various sample-centered and group-centered visualizations,
  sample similarity analyses and functional enrichment analyses. The underlying SOM
  algorithm combines feature clustering, multidimensional scaling and dimension reduction,
  along with strong visualization capabilities. It enables extraction and description
  of functional expression modules inherent in the data.
authors:
- family-names: Loeffler-Wirth
  given-names: Henry
  email: wirth@izbi.uni-leipzig.de
- family-names: Le
  given-names: Hoang Thanh
  email: le@izbi.uni-leipzig.de
- family-names: Kalcher
  given-names: Martin
  email: mkalcher@porkbox.net
preferred-citation:
  type: article
  title: 'oposSOM: R-package for high-dimensional portraying of genome-wide expression
    landscapes on Bioconductor.'
  authors:
  - family-names: Loeffler-Wirth
    given-names: Henry
    email: wirth@izbi.uni-leipzig.de
  - family-names: Kalcher
    given-names: Martin
    email: mkalcher@porkbox.net
  - family-names: Binder
    given-names: Hans
  journal: Bioinformatics
  year: '2015'
repository: https://bioc.r-universe.dev
url: http://som.izbi.uni-leipzig.de
contact:
- family-names: Loeffler-Wirth
  given-names: Henry
  email: wirth@izbi.uni-leipzig.de