NEWS

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netZooR 1.6.1

• Update: MONSTER has a wrapper function to process input
  • Update: LIONESS can use new data merging strategies ('union','intersection','legacy') as opposed to union by default

netZooR 1.6.0

• New method: COBRA for batch-effect correction in correlation networks
  • New method: BLOBFISH for estimating null models for gene regulatory networks
  • New method: TIGER finds transcription factor activity using a Bayesian approach

netZooR 1.3.2

• R implementation of SPIDER
  • R implementation of DRAGON
  • header argument in pandaPy

netZooR 1.1.12

• Reactivated unit tests for Ubuntu GitHub actions.
  • LIONESS can now build single-sample coexpression networks using @kshutta's implementation
  • Fix for ALPACA singleton community case (detected by @talkhanz)
  • Fix for CRANE significance test on constant modularity scores (detected by @talkhanz)
  • Improved method description by @kshutta
  • Fix for PANDA edge case when only expression is provided