# -------------------------------------------- # CITATION file created with {cffr} R package # See also: https://docs.ropensci.org/cffr/ # -------------------------------------------- cff-version: 1.2.0 message: 'To cite package "nearBynding" in publications use:' type: software license: Artistic-2.0 title: 'nearBynding: Discern RNA structure proximal to protein binding' version: 1.15.0 doi: 10.32614/CRAN.package.nearBynding abstract: Provides a pipeline to discern RNA structure at and proximal to the site of protein binding within regions of the transcriptome defined by the user. CLIP protein-binding data can be input as either aligned BAM or peak-called bedGraph files. RNA structure can either be predicted internally from sequence or users have the option to input their own RNA structure data. RNA structure binding profiles can be visually and quantitatively compared across multiple formats. authors: - family-names: Busa given-names: Veronica email: vbusa1@jhmi.edu repository: https://bioc.r-universe.dev commit: 521f662226bdec0139cf98252bf0c2676beeb655 contact: - family-names: Busa given-names: Veronica email: vbusa1@jhmi.edu