To cite package ‘msqrob2’ in publications use: Goeminne L, Gevaert K, Clement L (2016). “Peptide-level Robust Ridge Regression Improves Estimation, Sensitivity, and Specificity in Data-dependent Quantitative Label-free Shotgun Proteomics.” _Molecular & Cellular Proteomics_, *15*(2), 657-668. doi:10.1074/mcp.m115.055897 , . A BibTeX entry for LaTeX users is @Article{, title = {Peptide-level Robust Ridge Regression Improves Estimation, Sensitivity, and Specificity in Data-dependent Quantitative Label-free Shotgun Proteomics}, author = {Ludger Goeminne and Kris Gevaert and Lieven Clement}, journal = {Molecular & Cellular Proteomics}, year = {2016}, volume = {15}, number = {2}, pages = {657-668}, doi = {https://doi.org/10.1074/mcp.m115.055897}, url = {https://doi.org/10.1074/mcp.m115.055897}, } Sticker A, Goeminne L, Martens L, Clement L (2020). “Robust Summarization and Inference in Proteome-wide Label-free Quantification.” _Molecular & Cellular Proteomics_, *19*(7), 1209-1219. doi:10.1074/mcp.ra119.001624 , . A BibTeX entry for LaTeX users is @Article{, title = {Robust Summarization and Inference in Proteome-wide Label-free Quantification}, author = {Adriaan Sticker and Ludger Goeminne and Lennart Martens and Lieven Clement}, journal = {Molecular & Cellular Proteomics}, year = {2020}, volume = {19}, number = {7}, pages = {1209-1219}, doi = {https://doi.org/10.1074/mcp.ra119.001624}, url = {https://doi.org/10.1074/mcp.ra119.001624}, } Sticker A, Goeminne L, Martens L, Gevaert K, Clement L (2020). “MSqRob Takes the Missing Hurdle: Uniting Intensity- and Count-Based Proteomics.” _Analytical Chemistry_, *92*(9), 6278–6287. doi:10.1021/acs.analchem.9b04375 , . A BibTeX entry for LaTeX users is @Article{, title = {MSqRob Takes the Missing Hurdle: Uniting Intensity- and Count-Based Proteomics}, author = {Adriaan Sticker and Ludger Goeminne and Lennart Martens and Kris Gevaert and Lieven Clement}, journal = {Analytical Chemistry}, year = {2020}, volume = {92}, number = {9}, pages = {6278–6287}, url = {https://doi.org/10.1021/acs.analchem.9b04375}, doi = {https://doi.org/10.1021/acs.analchem.9b04375}, }