# ------------------------------------------------
# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# ------------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "msd16s" in publications use:'
type: software
license: Artistic-2.0
title: 'msd16s: Healthy and moderate to severe diarrhea 16S expression data'
version: 1.33.0
doi: 10.1186/gb-2014-15-6-r76
identifiers:
- type: doi
  value: 10.32614/CRAN.package.msd16s
abstract: Gut 16S sequencing expression data from 992 healthy and moderate-to-severe
  diarrhetic samples used in 'Diarrhea in young children from low-income countries
  leads to large-scale alterations in intestinal microbiota composition'.
authors:
- family-names: Paulson
  given-names: Joseph N.
  email: jpaulson@umiacs.umd.edu
- family-names: Paulson
  given-names: Joseph N.
- family-names: Bravo
  given-names: Hector Corrada
- family-names: Pop
  given-names: Mihai
preferred-citation:
  type: article
  title: Diarrhea in young children from low-income countries leads to large-scale
    alterations in intestinal microbiota composition
  authors:
  - family-names: Pop
    given-names: Mihai
  - family-names: Walker
    given-names: Alan W.
  - family-names: Paulson
    given-names: Joseph N.
    email: jpaulson@umiacs.umd.edu
  - family-names: Lindsay
    given-names: Brianna
  - family-names: Antonio
    given-names: Martin
  - family-names: Hossain
    given-names: M. Anowar
  - family-names: Oundo
    given-names: Joseph
  - family-names: Tamboura
    given-names: Boubou
  - family-names: Mai
    given-names: Volker
  - family-names: Astrovskaya
    given-names: Irina
  - family-names: Bravo
    given-names: Hector Corrada
  - family-names: Rance
    given-names: Richard
  - family-names: Stares
    given-names: Mark
  - family-names: Levine
    given-names: Myron M.
  - family-names: Panchalingam
    given-names: Sandra
  - family-names: Kotloff
    given-names: Karen
  - family-names: Ikumapayi
    given-names: Usman N.
  - family-names: Ebruke
    given-names: Chinelo
  - family-names: Adeyemi
    given-names: Mitchell
  - family-names: Ahmed
    given-names: Dilruba
  - family-names: Ahmed
    given-names: Firoz
  - family-names: Alam
    given-names: Meer Taifur
  - family-names: Amin
    given-names: Ruhul
  - family-names: Siddiqui
    given-names: Sabbir
  - family-names: Ochieng
    given-names: John B.
  - family-names: Ouma
    given-names: Emmanuel
  - family-names: Juma
    given-names: Jane
  - family-names: Mailu
    given-names: Euince
  - family-names: Omore
    given-names: Richard
  - family-names: Morris
    given-names: J. Glenn
  - family-names: Breiman
    given-names: Robert F.
  - family-names: Saha
    given-names: Debasish
  - family-names: Parkhill
    given-names: Julian
  - family-names: Nataro
    given-names: James P.
  - family-names: Stine
    given-names: O. Colin
  journal: Genome Biol
  volume: '15'
  issue: '6'
  year: '2014'
  doi: 10.1186/gb-2014-15-6-r76
  issn: '-5441'
  start: R76
repository: https://bioc.r-universe.dev
commit: a3efc3b3c758d07a81d3afb912a8036c7bcff075
url: http://www.cbcb.umd.edu/research/projects/GEMS-pathogen-discovery
date-released: '2026-04-28'
contact:
- family-names: Paulson
  given-names: Joseph N.
  email: jpaulson@umiacs.umd.edu