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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "msa" in publications use:'
type: software
license: GPL-2.0-or-later
title: 'msa: Multiple Sequence Alignment'
version: 1.37.4
doi: 10.1093/bioinformatics/btv494
identifiers:
- type: doi
  value: 10.32614/CRAN.package.msa
abstract: The 'msa' package provides a unified R/Bioconductor interface to the multiple
  sequence alignment algorithms ClustalW, ClustalOmega, and Muscle. All three algorithms
  are integrated in the package, therefore, they do not depend on any external software
  tools and are available for all major platforms. The multiple sequence alignment
  algorithms are complemented by a function for pretty-printing multiple sequence
  alignments using the LaTeX package TeXshade.
authors:
- family-names: Bodenhofer
  given-names: Ulrich
  email: ulrich@bodenhofer.com
- family-names: Bonatesta
  given-names: Enrico
- family-names: Kainrath
  given-names: Christoph
preferred-citation:
  type: article
  title: 'msa: an R package for multiple sequence alignment'
  authors:
  - family-names: Bodenhofer
    given-names: Ulrich
    email: ulrich@bodenhofer.com
  - family-names: Bonatesta
    given-names: Enrico
  - family-names: Horejs-Kainrath
    given-names: Christoph
  - family-names: Hochreiter
    given-names: Sepp
  journal: Bioinformatics
  volume: '31'
  issue: '24'
  year: '2015'
  doi: 10.1093/bioinformatics/btv494
  start: '3997'
  end: '3999'
repository: https://bioc.r-universe.dev
repository-code: https://github.com/UBod/msa
commit: c3ecf2928aa56b6071f6bf5fbdce3417b8e8596e
url: https://github.com/UBod/msa
date-released: '2024-08-23'
contact:
- family-names: Bodenhofer
  given-names: Ulrich
  email: ulrich@bodenhofer.com