NEWS

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miaViz 1.13

• plot*Tree: bugfix, ununique nodes
• Added confidence.level parameter to plotCCA
• add plotNMDS to miaViz (plotNMDS deprecated in mia)
• Added getNeatOrder function
• plotAbundance: enable plotting without agglomeration
• Change parameter naming convention from parameter_name to parameter.name

miaViz 1.11

• replace addTaxonomyTree with addHierarchyTree after renaming in mia package

miaViz 1.9

• Updated plotDMN to work with newest mia version
• Added plotCCA and plotRDA functions

miaViz 1.7.2 (2022-02-17)

• assay_name argument changed to assay.type

miaViz 1.7

• Fixed plotGraph* that was broked due changes in dependencies

miaViz 1.5

• plot*Tree & *TreeData: Add support for multiple trees
• plot*Tree layout bugfix

miaViz 1.3

• Bugfix for plotting functions to support sparseMatrix and other assay types (2021-12-31)
• Replaced abund_values with assay_name

miaViz 1.1

• Added plotAbundanceDensity (2021-06-23)

miaViz 0.99.0 (2021-03-19)

• Submitted to Bioconductor