Changes in version 1.17.1                        

    o   updated or fixed the following functions:
	+ getCposDensity : fixed the warning message in checking for NA in a list 

                        Changes in version 1.4.3                        

    o   updated or fixed the following functions:
	+ findDMR: updated the function to allow it to run without number of processor specification

                        Changes in version 1.4.2                        

    o   updated or fixed the following functions:
	+ meth.stats: updated the coverage object error in this function

                        Changes in version 1.4.1                        

    o   updated or fixed the following functions:
	+ pool.reads: added this new function to pool reads of replicates into a single file for each condition

                        Changes in version 1.3.3                        

    o   updated or fixed the following functions:
	+ profileDNAmetBinParallel: fixed the error when there is single minus strand in GRanges for profiling

                        Changes in version 1.3.2                        

    o   updated or fixed the following functions:
	+ meth.call: coverage is outputted now as an GRanges object
	+ findDMR: coverage threshold is used even for unmethylated cytosines
	+ getCposChr: fixed bug which was ignoring Cytosines at the boundary of genomic ranges on both sides

                        Changes in version 1.2.1                        

    o   updated or fixed the following functions:
	+ plotMeth: updated arguments: grl, brmeth and genomic co-ordinates; removed arguments: Datatrackname 
	+ updated vignette

                        Changes in version 1.0.4                        

    o   updated or fixed the following functions:
	+ BSprepare: fixed the problem of chromosome name with numeric values
	+ updated all examples with updated tabix indexed files
	+ updated vignette

                        Changes in version 1.0.3                        

    o   updated or fixed the following functions:
	+ BSprepare: fixed the problem of unsorted files
	+ BSprepare: fixed the problem of methylation files with numeric chromosome name
	+ methstats: Added a new function to provide descriptive statistics of methylation data

                        Changes in version 1.0.2                        

    o   updated or fixed the following functions:
	+ profileDNAmetBinParallel
	+ updated R version dependency information

                        Changes in version 1.0.0                        

    o   initial version with the following functions implemented:
	+ mCsmoothing
	+ findPMDs
	+ plotAnnoBar
	+ mapBSdata2GRanges
	+ findDMR
	+ consolidateDMRs
	+ getCpos
	+ profileDNAmetBin
	+ plotMeth
	+ BSprepare
	+ meth.call
	+ GElist-class
	+ GEcollection-class
	+ BSdataSet-class
	+ BSdata-class