NEWS

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metagene2 1.7.2 (2020-12-17)

• Removed support for NCIS normalization, which relied on a now deprecated package.

metagene2 1.3.3 (2019-11-13)

• Fixed a bug which caused overlapping contiguous regions to be assigned the wrong coverage values.

metagene2 1.3.1 (2019-11-05)

• Added the metagene2_heatmap function, which generates heatmap representation of the binned coverages underlying the metagene2 object.

metagene2 1.1.4 (2019-07-12)

• Improved documentation of control samples in design.

metagene2 1.1.3 (2019-05-13)

• When parameter validation fails, the metagene2 object will now fall back to the previous set of parameters, instead of ending up in an invalid state.

metagene2 1.1.2 (2019-05-09)

• rnaseq mode now sets strand_specific to TRUE by default.

metagene2 1.1.1 (2019-05-03)

• Added log2_ratio normalization option.
• Fix a bug that prevented strand_specific and stitch mode to work together.

metagene2 1.1.0 (2019-04-05)

• Submitted package to Bioconductor.