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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "metabCombiner" in publications use:'
type: software
license: GPL-3.0-only
title: 'metabCombiner: Method for Combining LC-MS Metabolomics Feature Measurements'
version: 1.15.2
identifiers:
- type: doi
  value: 10.32614/CRAN.package.metabCombiner
abstract: This package aligns LC-HRMS metabolomics datasets acquired from biologically
  similar specimens analyzed under similar, but not necessarily identical, conditions.
  Peak-picked and simply aligned metabolomics feature tables (consisting of m/z, rt,
  and per-sample abundance measurements, plus optional identifiers & adduct annotations)
  are accepted as input. The package outputs a combined table of feature pair alignments,
  organized into groups of similar m/z, and ranked by a similarity score. Input tables
  are assumed to be acquired using similar (but not necessarily identical) analytical
  methods.
authors:
- family-names: Habra
  given-names: Hani
  email: hhabra1@gmail.com
preferred-citation:
  type: article
  title: 'metabCombiner: Paired Untargeted LC-HRMS Metabolomics Feature Matching and
    Concatenation of Disparately Acquired Data Sets'
  authors:
  - family-names: Habra
    given-names: H.
  - family-names: Kachman
    given-names: M.
  - family-names: Bullock
    given-names: K.
  - family-names: Clish
    given-names: C.
  - family-names: Evans
    given-names: C.
  - family-names: Karnovsky
    given-names: A.
  journal: Analytical Chemistry
  year: '2021'
  month: '3'
  volume: '93'
  issue: '12'
  url: https://doi.org/10.1021/acs.analchem.0c03693
repository: https://bioc.r-universe.dev
repository-code: https://www.github.com/hhabra/metabCombiner
commit: d2488243c1f2e2989f7aceca60087506907f2f66
url: https://www.github.com/hhabra/metabCombiner
date-released: '2024-05-23'
contact:
- family-names: Habra
  given-names: Hani
  email: hhabra1@gmail.com
references:
- type: article
  title: 'metabCombiner 2.0: Disparate Multi-Dataset Feature Alignment for LC-MS Metabolomics'
  authors:
  - family-names: Habra
    given-names: H.
  - family-names: Meijer
    given-names: J.
  - family-names: Shen
    given-names: T.
  - family-names: Fiehn
    given-names: O.
  - family-names: Gaul
    given-names: D.
  - family-names: Fernández
    given-names: F.
  - family-names: Rempfert
    given-names: K.
  - family-names: Metz
    given-names: T.
  - family-names: Peterson
    given-names: K.
  - family-names: Evans
    given-names: C.
  - family-names: Karnovsky
    given-names: A.
  journal: Metabolites
  year: '2024'
  month: '1'
  volume: '14'
  issue: '2'
  url: https://doi.org/10.1021/acs.analchem.0c03693