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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "memes" in publications use:'
type: software
license: MIT
title: 'memes: motif matching, comparison, and de novo discovery using the MEME Suite'
version: 1.13.0
doi: 10.1371/journal.pcbi.1008991
abstract: A seamless interface to the MEME Suite family of tools for motif analysis.
  'memes' provides data aware utilities for using GRanges objects as entrypoints to
  motif analysis, data structures for examining & editing motif lists, and novel data
  visualizations. 'memes' functions and data structures are amenable to both base
  R and tidyverse workflows.
authors:
- family-names: Nystrom
  given-names: Spencer
  email: nystromdev@gmail.com
  orcid: https://orcid.org/0000-0003-1000-1579
preferred-citation:
  type: article
  title: 'Memes: A motif analysis environment in R using tools from the MEME Suite'
  authors:
  - family-names: Nystrom
    given-names: Spencer L.
  - family-names: McKay
    given-names: Daniel J.
  journal: PLOS Computational Biology
  year: '2021'
  doi: 10.1371/journal.pcbi.1008991
  volume: '17'
  url: https://doi.org/10.1371/journal.pcbi.1008991
  start: 1-14
repository: https://bioc.r-universe.dev
repository-code: https://github.com/snystrom/memes
url: https://snystrom.github.io/memes/
contact:
- family-names: Nystrom
  given-names: Spencer
  email: nystromdev@gmail.com
  orcid: https://orcid.org/0000-0003-1000-1579