To cite package ‘megadepth’ in publications use:

  Zhang D, Collado-Torres L (2024). _megadepth: BigWig and BAM related
  utilities_. doi:10.18129/B9.bioc.megadepth
  <https://doi.org/10.18129/B9.bioc.megadepth>,
  https://github.com/LieberInstitute/megadepth - R package version
  1.15.0, <http://www.bioconductor.org/packages/megadepth>.

A BibTeX entry for LaTeX users is

  @Manual{,
    title = {megadepth: BigWig and BAM related utilities},
    author = {David Zhang and Leonardo Collado-Torres},
    year = {2024},
    url = {http://www.bioconductor.org/packages/megadepth},
    note = {https://github.com/LieberInstitute/megadepth - R package version 1.15.0},
    doi = {10.18129/B9.bioc.megadepth},
  }

  Wilks C, Ahmed O, Baker DN, Zhang D, Collado-Torres L, Langmead B
  (2020). “Megadepth: efficient coverage quantification for BigWigs and
  BAMs.” _bioRxiv_. doi:10.1101/2020.12.17.423317
  <https://doi.org/10.1101/2020.12.17.423317>,
  <https://www.biorxiv.org/content/10.1101/2020.12.17.423317v1>.

A BibTeX entry for LaTeX users is

  @Article{,
    title = {Megadepth: efficient coverage quantification for BigWigs and BAMs},
    author = {Christopher Wilks and Omar Ahmed and Daniel N. Baker and David Zhang and Leonardo Collado-Torres and Ben Langmead},
    year = {2020},
    journal = {bioRxiv},
    doi = {https://doi.org/10.1101/2020.12.17.423317},
    url = {https://www.biorxiv.org/content/10.1101/2020.12.17.423317v1},
  }