Li M, Cobbold SA, Smyth GK (2025). Quantification and differential analysis of mass spectrometry proteomics data with probabilistic recovery of information from missing values. bioRxiv 29 April,<doi:10.1101/2025.04.28.651125>.

Li M, Smyth GK (2023). Neither random nor censored: estimating intensity-dependent probabilities for missing values in label-free proteomics. Bioinformatics 39(5), btad200.

Corresponding BibTeX entries:

  @Article{,
    author = {Mengbo Li and Simon A Cobbold and Gordon K Smyth},
    title = {Quantification and differential analysis of mass
      spectrometry proteomics data with probabilistic recovery of
      information from missing values},
    journal = {bioRxiv},
    year = {2025},
    volume = {April 29},
    pages = {651125},
    doi = {10.1101/2025.04.28.651125},
  }

  @Article{,
    author = {Mengbo Li and Gordon K Smyth},
    title = {Neither random nor censored: estimating
      intensity-dependent probabilities for missing values in
      label-free proteomics},
    journal = {Bioinformatics},
    year = {2023},
    volume = {39},
    number = {5},
    pages = {btad200},
    doi = {10.1093/bioinformatics/btad200},
  }