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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "iscream" in publications use:'
type: software
license: MIT
title: 'iscream: Make fast and memory efficient BED file queries, summaries and matrices'
version: 1.3.0
doi: 10.32614/CRAN.package.iscream
identifiers:
- type: url
  value: https://github.com/huishenlab/iscream/
abstract: 'BED files store ranged genomic data that can be queried even when the files
  are compressed. iscream can query data from BED files and return them in muliple
  formats: parsed records or their summary statistics as data frames or GenomicRanges
  objects, and matrices as matrix, GenomicRanges, or SummarizedExperiment objects.
  iscream also provides specialized support for importing methylation data.'
authors:
- family-names: Eapen
  given-names: James
  email: james.eapen@vai.org
  orcid: https://orcid.org/0000-0001-6016-3598
- family-names: Morrison
  given-names: Jacob
  email: jacob.morrison@vai.org
  orcid: https://orcid.org/0000-0001-8592-4744
- family-names: Shen
  given-names: Hui
  email: hui.shen@vai.org
  orcid: https://orcid.org/0000-0001-9767-4084
repository: https://bioc.r-universe.dev
repository-code: https://github.com/huishenlab/iscream/issues/
commit: a142d5418b2cf78de1793786a23be25523c6715b
url: https://huishenlab.github.io/iscream/
date-released: '2026-04-28'
contact:
- family-names: Eapen
  given-names: James
  email: james.eapen@vai.org
  orcid: https://orcid.org/0000-0001-6016-3598