NEWS

---

igvShiny 2025-09-02 (2025-09-02)

• support passing additional track options to igv.js

igvShiny 2025-09-01 (2025-09-01)

• migrate from RUnit to testthat

igvShiny 2024-08-29 (2024-08-29)

• fix issue with loading bed files when app is run with query strings

igvShiny 2024-08-25 (2024-08-25)

• switch from Rcurl::url.exists to httr::http_error (Windows compatibility)

• stop using Amazon S3 URLs by default

igvShiny 2024-08-16 (2024-08-16)

• fix issue with VCF files

igvShiny 2024-08-10 (2024-08-10)

• fix issue with custom files not working properly

• sync with Bioconductor (3_19 release)

igvShiny 2024-04-23 (2024-04-23)

• change file links from igv-data.systemsbiology.net to gladki.pl/igvr

igvShiny 2024-03-16 (2024-03-16)

• add shinytest2 for igvShinyDemo-GFF3.R

igvShiny 2024-03-14 (2024-03-14)

• fix issues with GFF3 data
  • make igvShiny demo app for GFF3 working
  • update trackName of GFF3 (from URL)
  • udpate path to local GFF3

igvShiny 2024-02-28 (2024-02-28)

• add pkgdown content

igvShiny 2024-02-16 (2024-02-16)

• fix bug in function loadBamTrackFromLocalData
• improvge way of loading BAM files - show mismatches

igvShiny 2024-02-09 (2024-02-09)

• fix some Bioconductor NOTEs

igvShiny 2024-02-05 (2024-02-05)

• fix some Bioconductor NOTEs

igvShiny 2024-02-04 (2024-02-04)

• make the first Bioconductor release

igvShiny 1.9.3

• ci: fix Windows/macOS CI failures (install pkgload alongside pkgdown)
• ci: add automated push to Bioconductor devel on merge to master

igvShiny 1.9.2

• fix(ci): add testthat to Suggests field in DESCRIPTION to fix warning

igvShiny 1.9.1

• fix(ci): remove missing test_igvShiny_package.R from Collate field to fix build error

igvShiny 1.9.0

• Version bump due to Bioconductor 3.23 devel synchronization.