Please cite the articles below for the 'ideal' software itself, or its usage in combined workflows with the 'pcaExplorer' or 'GeneTonic' software packages: Federico Marini, Jan Linke, Harald Binder (2020). ideal: an R/Bioconductor package for Interactive Differential Expression Analysis. BMC Bioinformatics, 21, 565, . A BibTeX entry for LaTeX users is @Article{, title = {ideal: an R/Bioconductor package for Interactive Differential Expression Analysis}, journal = {BMC Bioinformatics}, author = {Federico Marini and Jan Linke and Harald Binder}, volume = {21}, pages = {565}, year = {2020}, doi = {10.1186/s12859-020-03819-5}, url = {https://bioconductor.org/packages/ideal/}, } Annekathrin Ludt, Arsenij Ustjanzew, Harald Binder, Konstantin Strauch, Federico Marini (2022). Interactive and Reproducible Workflows for Exploring and Modeling RNA-seq Data with pcaExplorer, ideal, and GeneTonic. Current Protocols, 2 (4), e411, . A BibTeX entry for LaTeX users is @Article{, title = {Interactive and Reproducible Workflows for Exploring and Modeling RNA-seq Data with pcaExplorer, ideal, and GeneTonic}, journal = {Current Protocols}, author = {Annekathrin Ludt and Arsenij Ustjanzew and Harald Binder and Konstantin Strauch and Federico Marini}, volume = {2}, number = {4}, pages = {e411}, year = {2022}, month = {Apr}, doi = {10.1002/cpz1.411}, }