Package: iSEEid
Title: iSEE extension to assist in identifying sets of samples/cells
Version: 0.99.1
Authors@R: 
    c(
        person("Federico", "Marini", role= c("aut", "cre"), email = "marinif@uni-mainz.de", comment = c(ORCID = '0000-0003-3252-7758')),
        person("Kevin", "Rue-Albrecht", role = c("aut"), email = "kevinrue67@gmail.com", comment = c(ORCID = "0000-0003-3899-3872")),
        person("Charlotte", "Soneson", role = c("aut"), email = "charlottesoneson@gmail.com", comment = c(ORCID = '0000-0003-3833-2169')))
Description: This package provides a dedicated panel to assist the
        sample identification within a single iSEE web-application. The
        main functionality of this package can be adopted to
        efficiently select samples (e.g. cells) that need to be
        identified and annotated in the analysis workflow. With iSEEid,
        the iSEE framework fully qualifies to be an ideal companion for
        assigning appropriate labels to large omics datasets.
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
Depends: iSEE, SummarizedExperiment
Imports: methods, shiny, shinyAce
Suggests: scRNAseq, scater, knitr, rmarkdown, BiocStyle, testthat (>=
        3.0.0), scrapper
URL: https://github.com/iSEE/iSEEid
BugReports: https://github.com/iSEE/iSEEid/issues
VignetteBuilder: knitr
biocViews: CellBasedAssays, Clustering, DimensionReduction,
        FeatureExtraction, GeneExpression, GUI, ImmunoOncology,
        ShinyApps, SingleCell, Transcription, Transcriptomics,
        Visualization
Config/testthat/edition: 3
Config/roxygen2/version: 8.0.0
Config/pak/sysreqs: cmake libglpk-dev make libpng-dev libuv1-dev
        libxml2-dev perl zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-06-29 10:47:16 UTC
RemoteUrl: https://github.com/bioc/iSEEid
RemoteRef: HEAD
RemoteSha: 456e3530541ec7425d108af01ab41894c73ecfeb
NeedsCompilation: no
Packaged: 2026-06-29 14:19:25 UTC; root
Author: Federico Marini [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-3252-7758>),
  Kevin Rue-Albrecht [aut] (ORCID:
    <https://orcid.org/0000-0003-3899-3872>),
  Charlotte Soneson [aut] (ORCID:
    <https://orcid.org/0000-0003-3833-2169>)
Maintainer: Federico Marini <marinif@uni-mainz.de>