NEWS

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hiReadsProcessor 1.29.1

• Suggest 'markdown' package in DESCRIPTION

hiReadsProcessor 1.19.1

• Dropped rSFFreader dependency

hiReadsProcessor 1.9.3

• Namespace fixes for base R packages to alleviate build errors
• Updated findOverlap calls to use the new drop.self & drop.redundant args

hiReadsProcessor 1.9.1

• Using readxl to import sampleInfo excel file
• Minor code improvements for merging internal objects and cleaning data
• Removed parameter interactive in read.SeqFolder in favor of base::interactive()
• findOverlap calls updated to use ignoreRedundant & ignoreSelf
• splitSeqsToFiles receives outDir parameter

hiReadsProcessor 1.4.0

• Using dplyr for small computations

hiReadsProcessor 1.1.3

• Modified all bplapply calls
• Moved BiocGenerics and rSFFreader to Imports

hiReadsProcessor 0.99.0

• Added examples for almost all functions
• Removed Subread support

hiReadsProcessor 0.3.35

• Added annotateSites

hiReadsProcessor 0.3.34

• Bug fix dereplicateReads & write.psl