Bug fixes
(v. 1.11.1) unlink cache on Bioconductor build system once every 2 weeks to mitigate cache corruption.
(v. 1.11.2) manifest() requires modification to accommodate changes
introduced by HCA
New features
project_title() and project_information()
to retrieve summary information from project IDs.New features
(v. 1.5.1) Implement hca_view() for intereactive tibble view & filter
(v. 1.5.7) Allow user to specify prefered catalog via argument to
catalogs()
User visible changes
(v. 1.5.3) Provide more default projects() columns (similar to
data portal).
(v. 1.5.4) Improve vignette readability by shortening output of some
code chunks; use built-in 'pipe', |>.
Bug fixes
(v. 1.5.2) projects() constructs the complete tibble of projects
by paging through result sets of size 100, to accommodate upstream
changes. See https://github.com/Bioconductor/hca/issues/33
(v. 1.5.5) facet_options()consults the correct part of the updated
API specification to find available filters.
New features
manifest() endpoint. Impement "tibble_expand"
option for projects(), bundles(), samples(), and files(). Implement
optimus_loom_annotation().Bug fixes
manifest() uses all rows to guess column format.Bug fixes
.as_tbl_hca() supports queries where
all values are NULLprojects(), files(), samples(), and bundles() are applied;
ensure that all tibbles have minimum necessary columns.files_download() to clarify error messagefiles_download() to avoid unnecessary downloadsfilters() to handle long character strings
without newline breaksNEWS.md file to track changes to the package.