Package: h5vc
Type: Package
Title: Managing alignment tallies using a hdf5 backend
Version: 2.47.1
Author: Paul Theodor Pyl
Maintainer: Paul Theodor Pyl <paul.theodor.pyl@gmail.com>
Description: This package contains functions to interact with tally
        data from NGS experiments that is stored in HDF5 files.
License: GPL (>= 3)
VignetteBuilder: knitr
Depends: R (>= 3.0.2), ggplot2 (>= 3.0.0)
LinkingTo: Rhtslib (>= 1.99.1)
Imports: rhdf5, reshape, stats, graphics, utils, S4Vectors, IRanges,
        Biostrings, Rsamtools (>= 2.13.1), methods, GenomicRanges,
        abind, BiocParallel, BatchJobs, h5vcData, GenomeInfoDb
Suggests: knitr, locfit, BSgenome.Hsapiens.UCSC.hg19,
        BSgenome.Hsapiens.NCBI.GRCh38, RUnit, BiocGenerics, rmarkdown
SystemRequirements: GNU make
Config/pak/sysreqs: make libbz2-dev libicu-dev liblzma-dev libssl-dev
        xz-utils zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-10-01 08:17:07 UTC
RemoteUrl: https://git.bioconductor.org/packages/h5vc
RemoteRef: HEAD
RemoteSha: c99b5b9ee6691af62b894fbdc4018b66594c9bd3
NeedsCompilation: yes
Packaged: 2026-10-09 14:12:27 UTC; root