# ------------------------------------------------
# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# ------------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "grayleafspotr" in publications use:'
type: software
license: Apache-2.0
title: 'grayleafspotr: Quantitative Analysis of Gray Leaf Spot Colonies from Plate
  Images'
version: 0.99.14
doi: 10.18129/B9.bioc.grayleafspotr
identifiers:
- type: doi
  value: 10.32614/CRAN.package.grayleafspotr
abstract: Quantitative phenotyping of gray leaf spot (Magnaporthe oryzae) fungal colonies
  grown on petri dishes. The package segments colonies from time-lapse plate photographs
  using a bundled SmallUNet deep-learning model, extracts morphometric and texture
  features (area, eccentricity, crack coverage, radial profile), and provides tidy
  result objects together with template ggplot2 visualisations. Python dependencies
  are managed automatically through basilisk; no manual environment setup is required.
authors:
- family-names: R
  given-names: Rohan
  email: phonics-tiffs1i@icloud.com
  orcid: https://orcid.org/0009-0005-9225-1775
preferred-citation:
  type: manual
  title: 'grayleafspotr: Quantitative Analysis of Gray Leaf Spot Colonies from Plate
    Images'
  authors:
  - family-names: R
    given-names: Rohan
    email: phonics-tiffs1i@icloud.com
    orcid: https://orcid.org/0009-0005-9225-1775
    affiliation: The Sainsbury Laboratory
  year: '2026'
  notes: R package version 0.99.14
  doi: 10.18129/B9.bioc.grayleafspotr
  url: https://github.com/rotsl/grayleafspotr
repository: https://bioc.r-universe.dev
repository-code: https://github.com/rotsl/grayleafspotr
commit: f4820b6c8c50f792db5ad17227a986e7b9139c98
url: https://rotsl.github.io/grayleafspotr
date-released: '2026-10-10'
contact:
- family-names: R
  given-names: Rohan
  email: phonics-tiffs1i@icloud.com
  orcid: https://orcid.org/0009-0005-9225-1775