Package: gep2pep
Type: Package
Title: Creation and Analysis of Pathway Expression Profiles (PEPs)
Version: 1.33.0
Date: 2019-03-30
Author: Francesco Napolitano <franapoli@gmail.com>
Maintainer: Francesco Napolitano <franapoli@gmail.com>
Description: Pathway Expression Profiles (PEPs) are based on the
        expression of pathways (defined as sets of genes) as opposed to
        individual genes. This package converts gene expression
        profiles to PEPs and performs enrichment analysis of both
        pathways and experimental conditions, such as "drug set
        enrichment analysis" and "gene2drug" drug discovery analysis
        respectively.
License: GPL-3
Imports: repo (>= 2.1.1), foreach, stats, utils, GSEABase, methods,
        Biobase, XML, rhdf5, digest, iterators
Suggests: WriteXLS, testthat, knitr, rmarkdown
RoxygenNote: 6.1.0
VignetteBuilder: knitr
biocViews: GeneExpression, DifferentialExpression, GeneSetEnrichment,
        DimensionReduction, Pathways, GO
Encoding: UTF-8
Config/pak/sysreqs: libpng-dev libxml2-dev libssl-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:46:56 UTC
RemoteUrl: https://github.com/bioc/gep2pep
RemoteRef: HEAD
RemoteSha: 89f7f434be861aa35670b5e7b6b50acedabb6179
NeedsCompilation: no
Packaged: 2026-10-06 08:51:07 UTC; root