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# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "geneClusterPattern" in publications use:'
type: software
license: MIT
title: 'geneClusterPattern: Plot conserved gene pattern across multiple species'
version: 0.99.2
abstract: An R package for constructing and comparing ortholog gene patterns around
  a focal gene across species. It enables the exploration of conserved gene neighborhoods
  (synteny) by organizing orthologous genes within a defined genomic window and aligning
  their relative positions across multiple genomes. It can retrieve homologous gene
  directly from Ensembl or it can incorporate user-provided ortholog group assignments.
authors:
- family-names: Ou
  given-names: Jianhong
  email: jou@morgridge.org
  orcid: https://orcid.org/0000-0002-8652-2488
- family-names: Poss
  given-names: Kenneth
  email: kposs@morgridge.org
repository: https://bioc.r-universe.dev
repository-code: https://github.com/jianhong/geneClusterPattern
commit: a879182eb1279b4e7e37e7da4530c461bd4a0274
url: https://github.com/jianhong/geneClusterPattern
date-released: '2026-09-15'
contact:
- family-names: Ou
  given-names: Jianhong
  email: jou@morgridge.org
  orcid: https://orcid.org/0000-0002-8652-2488