# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "gemma.R" in publications use:'
type: software
license: Apache-2.0
title: 'gemma.R: A wrapper for Gemma''s Restful API to access curated gene expression
  data and differential expression analyses'
version: 3.1.13
identifiers:
- type: doi
  value: 10.32614/CRAN.package.gemma.R
abstract: Low- and high-level wrappers for Gemma's RESTful API. They enable access
  to curated expression and differential expression data from over 10,000 published
  studies. Gemma is a web site, database and a set of tools for the meta-analysis,
  re-use and sharing of genomics data, currently primarily targeted at the analysis
  of gene expression profiles.
authors:
- family-names: Castillo-Arnemann
  given-names: Javier
  email: javiercastilloar@gmail.com
  orcid: https://orcid.org/0000-0002-5626-9004
- family-names: Sicherman
  given-names: Jordan
  email: jordan.sicherman@msl.ubc.ca
  orcid: https://orcid.org/0000-0001-8160-4567
- family-names: Mancarci
  given-names: Ogan
  email: ogan.mancarci@gmail.com
  orcid: https://orcid.org/0000-0002-1452-0889
- family-names: Poirier-Morency
  given-names: Guillaume
  email: poirigui@msl.ubc.ca
  orcid: https://orcid.org/0000-0002-6554-0441
preferred-citation:
  type: article
  title: Curation of over 10 000 transcriptomic studies to enable data reuse
  authors:
  - family-names: Lim
    given-names: Nathaniel
  - family-names: Tesar
    given-names: Stepan
  - family-names: Belmadani
    given-names: Manuel
  - family-names: Poirier-Morency
    given-names: Guillaume
    email: poirigui@msl.ubc.ca
    orcid: https://orcid.org/0000-0002-6554-0441
  - family-names: Mancarci
    given-names: Burak Ogan
  - family-names: Sicherman
    given-names: Jordan
    email: jordan.sicherman@msl.ubc.ca
    orcid: https://orcid.org/0000-0001-8160-4567
  - family-names: Jacobson
    given-names: Matthew
  - family-names: Leong
    given-names: Justin
  - family-names: Tan
    given-names: Patrick
  - family-names: Pavlidis
    given-names: Paul
  journal: Database
  year: '2021'
  volume: '2021'
  url: https://doi.org/10.1093/database/baab006
repository: https://bioc.r-universe.dev
repository-code: https://github.com/PavlidisLab/gemma.R
commit: 9f9c7c2ee6f7a7772df86db931e984582eaf95fd
url: https://pavlidislab.github.io/gemma.R/
contact:
- family-names: Mancarci
  given-names: Ogan
  email: ogan.mancarci@gmail.com
  orcid: https://orcid.org/0000-0002-1452-0889