Type: Package
Package: gDRcore
Title: Processing functions and interface to process and analyze drug
        dose-response data
Version: 1.11.18
Date: 2026-10-08
Authors@R: c(
    person("Bartosz", "Czech", , "czech.bartosz@external.gene.com", role = "aut",
           comment = c(ORCID = "0000-0002-9908-3007")),
    person("Arkadiusz", "Gladki", role=c("cre", "aut"), email="gladki.arkadiusz@gmail.com",
           comment = c(ORCID = "0000-0002-7059-6378")),
    person("Marc", "Hafner", role = "aut",
           comment = c(ORCID = "0000-0003-1337-7598")),
    person("Pawel", "Piatkowski", role = "aut"),
    person("Natalia", "Potocka", role = "aut"),
    person("Dariusz", "Scigocki", role = "aut"),
    person("Janina", "Smola", role=c("aut"),
           comment = c(ORCID = "0009-0007-4347-7748")),
    person("Sergiu", "Mocanu", role = "aut"),
    person("Marcin", "Kamianowski", role="aut"),
    person("Allison", "Vuong", role = "aut")
  )
Description: This package contains core functions to process and
        analyze drug response data. The package provides tools for
        normalizing, averaging, and calculation of gDR metrics data.
        All core functions are wrapped into the pipeline function
        allowing analyzing the data in a straightforward way.
License: Artistic-2.0
Depends: R (>= 4.2)
Imports: BumpyMatrix, BiocParallel, checkmate, drc, futile.logger,
        gDRutils (>= 1.11.12), jsonlite, MultiAssayExperiment, purrr,
        stringr, S4Vectors, SummarizedExperiment, data.table
Suggests: BiocStyle, gDRstyle (>= 1.7.1), gDRimport (>= 1.7.1),
        gDRtestData (>= 1.7.1), IRanges, knitr, pkgbuild, qs2,
        testthat, yaml
VignetteBuilder: knitr
URL: https://github.com/gdrplatform/gDRcore,
        https://gdrplatform.github.io/gDRcore/
BugReports: https://github.com/gdrplatform/gDRcore/issues
biocViews: Software, ShinyApps
ByteCompile: TRUE
DeploySubPath: gDRcore
Encoding: UTF-8
LazyLoad: yes
NeedsCompilation: yes
Roxygen: list(markdown = TRUE)
SwitchrLibrary: gDRcore
Config/roxygen2/version: 8.0.0
RoxygenNote: 7.3.1
Config/pak/sysreqs: cmake make libicu-dev libssl-dev libnode-dev
        zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-10-08 14:24:55 UTC
RemoteUrl: https://github.com/bioc/gDRcore
RemoteRef: HEAD
RemoteSha: 04cc3e026e2eaa0b284b7bdabc2528bb7a6be6c7
Packaged: 2026-10-11 13:01:27 UTC; root
Author: Bartosz Czech [aut] (ORCID: <https://orcid.org/0000-0002-9908-3007>),
  Arkadiusz Gladki [cre, aut] (ORCID:
    <https://orcid.org/0000-0002-7059-6378>),
  Marc Hafner [aut] (ORCID: <https://orcid.org/0000-0003-1337-7598>),
  Pawel Piatkowski [aut],
  Natalia Potocka [aut],
  Dariusz Scigocki [aut],
  Janina Smola [aut] (ORCID: <https://orcid.org/0009-0007-4347-7748>),
  Sergiu Mocanu [aut],
  Marcin Kamianowski [aut],
  Allison Vuong [aut]
Maintainer: Arkadiusz Gladki <gladki.arkadiusz@gmail.com>