Package: gDNAinRNAseqData
Title: RNA-seq data with different levels of gDNA contamination
Version: 1.13.0
Authors@R: person("Robert", "Castelo", email = "robert.castelo@upf.edu", role = c("aut", "cre"), comment=c(ORCID="0000-0003-2229-4508"))
Description: Provides access to BAM files generated from RNA-seq data
        produced with different levels of gDNA contamination. It
        currently allows one to download a subset of the data published
        by Li et al., BMC Genomics, 23:554, 2022. This subset of data
        is formed by BAM files with about 100,000 alignments with three
        different levels of gDNA contamination.
Depends: R (>= 4.3)
Imports: RCurl, XML, ExperimentHub, BiocGenerics, Rsamtools
Suggests: BiocStyle, knitr, rmarkdown
VignetteBuilder: knitr
License: Artistic-2.0
NeedsCompilation: no
Encoding: UTF-8
biocViews: ExperimentHub, ExperimentData, ExpressionData,
        SequencingData, RNASeqData, Homo_sapiens_Data
URL: https://github.com/functionalgenomics/gDNAinRNAseqData
BugReports: https://github.com/functionalgenomics/gDNAinRNAseqData
RoxygenNote: 7.2.3
Config/pak/sysreqs: make libbz2-dev libicu-dev liblzma-dev libpng-dev
        libxml2-dev libssl-dev xz-utils zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:36:41 UTC
RemoteUrl: https://github.com/bioc/gDNAinRNAseqData
RemoteRef: HEAD
RemoteSha: 34e1e2aa52d359ff3cb37ac0202d29553dc53626
Packaged: 2026-10-10 10:44:26 UTC; root
Author: Robert Castelo [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-2229-4508>)
Maintainer: Robert Castelo <robert.castelo@upf.edu>