# ------------------------------------------------
# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# ------------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "fluentGenomics" in publications use:'
type: software
license: MIT
title: 'fluentGenomics: A plyranges and tximeta workflow'
version: 1.25.0
abstract: An extended workflow using the plyranges and tximeta packages for fluent
  genomic data analysis. Use tximeta to correctly import RNA-seq transcript quantifications
  and summarize them to gene counts for downstream analysis. Use plyranges for clearly
  expressing operations over genomic coordinates and to combine results from differential
  expression and differential accessibility analyses.
authors:
- family-names: Lee
  given-names: Stuart
  email: stuart.andrew.lee@gmail.com
  orcid: https://orcid.org/0000-0003-1179-8436
- family-names: Love
  given-names: Michael
  email: michaelisaiahlove@gmail.com
repository: https://bioc.r-universe.dev
repository-code: https://github.com/sa-lee/fluentGenomics
commit: fc9849dc926e4666beb9a4924ed2788289e2415e
url: https://github.com/sa-lee/fluentGenomics
date-released: '2026-06-10'
contact:
- family-names: Lee
  given-names: Stuart
  email: stuart.andrew.lee@gmail.com
  orcid: https://orcid.org/0000-0003-1179-8436