To mention the R package 'flowAI' in your publication please cite the
article:

  Monaco,G. et al. (2016) flowAI: automatic and interactive anomaly
  discerning tools for flow cytometry data. Bioinformatics. 2016 Aug
  15;32(16):2473-80.

A BibTeX entry for LaTeX users is

  @Article{,
    title = {flowAI: automatic and interactive anomaly discerning tools for flow cytometry data},
    author = {Gianni Monaco and Hao Chen and Michael Poidinger and Jinmiao Chen and Joao Pedro {de Magalhaes} and Anis Larbi},
    journal = {Bioinformatics},
    year = {2016},
    volume = {32},
    number = {16},
    url = {10.1093/bioinformatics/btw191},
  }

In the case you need to cite only the software, use:

  Monaco,G. et al. (2024) flowAI: automatic and interactive quality
  control for flow cytometry data. R package version 1.35.2

A BibTeX entry for LaTeX users is

  @Manual{,
    title = {flowAI: automatic and interactive quality control for flow cytometry data},
    author = {Gianni Monaco and Hao Chen},
    year = {2024},
    note = {R package version 1.35.2},
    url = {10.18129/B9.bioc.flowAI},
  }

However, this is free open-source software implementing academic
research by the authors and co-workers. If you use it, please support
the project by citing the journal article.