Package: fission
Title: RangedSummarizedExperiment for time course RNA-Seq of fission
        yeast in response to stress, by Leong et al., Nat Commun 2014.
Version: 1.33.0
Author: Michael Love
Maintainer: Michael Love <michaelisaiahlove@gmail.com>
Description: This package provides a RangedSummarizedExperiment object
        of read counts in genes for a time course RNA-Seq experiment of
        fission yeast (Schizosaccharomyces pombe) in response to
        oxidative stress (1M sorbitol treatment) at 0, 15, 30, 60, 120
        and 180 mins. The samples are further divided between a
        wild-type group and a group with deletion of atf21. The read
        count matrix was prepared and provided by the author of the
        study: Leong HS, Dawson K, Wirth C, Li Y, Connolly Y, Smith DL,
        Wilkinson CR, Miller CJ. "A global non-coding RNA system
        modulates fission yeast protein levels in response to stress".
        Nat Commun 2014 May 23;5:3947. PMID: 24853205. GEO: GSE56761.
biocViews: ExperimentData, Genome, Saccharomyces_cerevisiae_Data,
        SequencingData, RNASeqData, GEO
License: LGPL
Depends: R (>= 2.10), SummarizedExperiment
Suggests: knitr, markdown
VignetteBuilder: knitr
Config/pak/sysreqs: zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:27:19 UTC
RemoteUrl: https://github.com/bioc/fission
RemoteRef: HEAD
RemoteSha: a0a3080ddadf6143d6f37eb86fa290316e50c097
NeedsCompilation: no
Packaged: 2026-10-10 10:34:10 UTC; root