Package: ffpe
Type: Package
Title: Quality assessment and control for FFPE microarray expression
        data
Version: 1.57.0
Author: Levi Waldron
Maintainer: Levi Waldron <lwaldron.research@gmail.com>
Description: Identify low-quality data using metrics developed for
        expression data derived from Formalin-Fixed, Paraffin-Embedded
        (FFPE) data.  Also a function for making Concordance at the Top
        plots (CAT-plots).
Collate: sampleQC.R sortedIqrPlot.R CATplot.R
Depends: R (>= 2.10.0), TTR, methods
Imports: Biobase, BiocGenerics, affy, lumi, methylumi, sfsmisc
Suggests: genefilter, ffpeExampleData
License: GPL (>2)
LazyLoad: yes
Packaged: 2026-07-15 04:52:48 UTC; root
biocViews: Microarray, GeneExpression, QualityControl
Config/pak/sysreqs: make libbz2-dev libicu-dev liblzma-dev libpng-dev
        libxml2-dev libssl-dev libx11-dev xz-utils zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:36:20 UTC
RemoteUrl: https://github.com/bioc/ffpe
RemoteRef: HEAD
RemoteSha: d854178d4fed0fdf3ff6bfde46f041de1ad64c1b
NeedsCompilation: no