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# CITATION file created with {cffr} R package
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cff-version: 1.2.0
message: 'To cite package "fabia" in publications use:'
type: software
license: LGPL-2.0-or-later
title: 'fabia: FABIA: Factor Analysis for Bicluster Acquisition'
version: 2.51.0
abstract: Biclustering by "Factor Analysis for Bicluster Acquisition" (FABIA). FABIA
  is a model-based technique for biclustering, that is clustering rows and columns
  simultaneously. Biclusters are found by factor analysis where both the factors and
  the loading matrix are sparse. FABIA is a multiplicative model that extracts linear
  dependencies between samples and feature patterns. It captures realistic non-Gaussian
  data distributions with heavy tails as observed in gene expression measurements.
  FABIA utilizes well understood model selection techniques like the EM algorithm
  and variational approaches and is embedded into a Bayesian framework. FABIA ranks
  biclusters according to their information content and separates spurious biclusters
  from true biclusters. The code is written in C.
authors:
- family-names: Mitterecker
  given-names: Andreas
  email: mitterecker@bioinf.jku.at
- family-names: Hochreiter
  given-names: Sepp
  email: hochreit@bioinf.jku.at
preferred-citation:
  type: article
  title: 'FABIA: Factor Analysis for Bicluster Acquisition'
  authors:
  - family-names: Hochreiter
    given-names: Sepp
    email: hochreit@bioinf.jku.at
  - family-names: Bodenhofer
    given-names: Ulrich
  - family-names: Heusel
    given-names: Martin
  - family-names: Mayr
    given-names: Andreas
  - family-names: Mitterecker
    given-names: Andreas
    email: mitterecker@bioinf.jku.at
  - family-names: Kasim
    given-names: Adetayo
  - family-names: Khamiakova
    given-names: Tatsiana
  - family-names: Van Sanden
    given-names: Suzy
  - family-names: Lin
    given-names: Dan
  - family-names: Talloen
    given-names: Willem
  - family-names: Bijnens
    given-names: Luc
  - family-names: G"ohlmann
    given-names: Hinrich W. H.
  - family-names: Shkedy
    given-names: Ziv
  - family-names: Clevert
    given-names: Djork-Arn'e
  journal: Bioinformatics
  volume: '26'
  issue: '12'
  notes: doi:10.1093/bioinformatics/btq227
  year: '2010'
  start: 1520-1527
repository: https://bioc.r-universe.dev
url: http://www.bioinf.jku.at/software/fabia/fabia.html
date-released: '2020-01-30'
contact:
- family-names: Mitterecker
  given-names: Andreas
  email: mitterecker@bioinf.jku.at