# ------------------------------------------------
# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "etec16s" in publications use:'
type: software
license: Artistic-2.0
title: 'etec16s: Individual-specific changes in the human gut microbiota after challenge
  with enterotoxigenic Escherichia coli and subsequent ciprofloxacin treatment'
version: 1.41.0
doi: 10.1186/s12864-016-2777-0
identifiers:
- type: doi
  value: 10.32614/CRAN.package.etec16s
abstract: 16S rRNA gene sequencing data to study changes in the faecal microbiota
  of 12 volunteers during a human challenge study with ETEC (H10407) and subsequent
  treatment with ciprofloxacin.
authors:
- family-names: Paulson
  given-names: Joseph N.
  email: jpaulson@jimmy.harvard.edu
preferred-citation:
  type: article
  title: Individual-specific changes in the human gut microbiota after challenge with
    enterotoxigenic Escherichia coli and subsequent ciprofloxacin treatment
  authors:
  - family-names: Pop
    given-names: Mihai
  - family-names: Paulson
    given-names: Joseph N.
    email: jpaulson@jimmy.harvard.edu
  - family-names: Chakraborty
    given-names: Subhra
  - family-names: Astrovskaya
    given-names: Irina
  - family-names: Lindsay
    given-names: Brianna
  - family-names: Li
    given-names: Shan
  - family-names: Bravo
    given-names: Hector Corrada
  - family-names: Harro
    given-names: Clayton
  - family-names: Parkhill
    given-names: Julian
  - family-names: Walker
    given-names: Alan W.
  - family-names: Walker
    given-names: Richard I.
  - family-names: Sack
    given-names: David A.
  - family-names: Stine
    given-names: O. Colin
  journal: BMC Genomics
  volume: '17'
  issue: '1'
  year: '2016'
  doi: 10.1186/s12864-016-2777-0
  url: http://dx.doi.org/10.1186/s12864-016-2777-0
  start: '1'
  end: '11'
repository: https://bioc.r-universe.dev
commit: 87d54113eb5f9a1d3548aae42c5dd5d475508216
date-released: '2026-04-28'
contact:
- family-names: Paulson
  given-names: Joseph N.
  email: jpaulson@jimmy.harvard.edu