# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "escape" in publications use:'
type: software
license: MIT
title: 'escape: Easy single cell analysis platform for enrichment'
version: 2.1.4
doi: 10.1038/s42003-020-01625-6
identifiers:
- type: doi
  value: 10.32614/CRAN.package.escape
abstract: A bridging R package to facilitate gene set enrichment analysis (GSEA) in
  the context of single-cell RNA sequencing. Using raw count information, Seurat objects,
  or SingleCellExperiment format, users can perform and visualize ssGSEA, GSVA, AUCell,
  and UCell-based enrichment calculations across individual cells.
authors:
- family-names: Borcherding
  given-names: Nick
  email: ncborch@gmail.com
- family-names: Andrews
  given-names: Jared
  email: jared.andrews07@gmail.com
preferred-citation:
  type: article
  title: Mapping the immune environment in clear cell renal carcinoma by single-cell
    genomics
  authors:
  - family-names: Borcherding
    given-names: Nicholas
  - family-names: Vishwakarma
    given-names: Ajaykumar
  - family-names: Voigt
    given-names: Andrew P.
  - family-names: Bellizzi
    given-names: Andrew
  - family-names: Kaplan
    given-names: Jacob
  - family-names: Nepple
    given-names: Kenneth
  - family-names: Salem
    given-names: Aliasger K.
  - family-names: Jenkins
    given-names: Russell W.
  - family-names: Zakharia
    given-names: Yousef
  - family-names: Zhang
    given-names: Weizhou
  journal: Communications Biology
  volume: '4'
  year: '2021'
  publisher:
    name: Nature
  doi: 10.1038/s42003-020-01625-6
  url: https://www.nature.com/articles/s42003-020-01625-6
repository: https://bioc.r-universe.dev
commit: 9c13be1535dc9894e5f0f04f0db64493b729a7ee
date-released: '2024-09-19'
contact:
- family-names: Borcherding
  given-names: Nick
  email: ncborch@gmail.com