Package 'epivizrServer'

Title: WebSocket server infrastructure for epivizr apps and packages
Description: This package provides objects to manage WebSocket connections to epiviz apps. Other epivizr package use this infrastructure.
Authors: Hector Corrada Bravo [aut, cre]
Maintainer: Hector Corrada Bravo <[email protected]>
License: MIT + file LICENSE
Version: 1.35.0
Built: 2024-11-06 05:58:11 UTC
Source: https://github.com/bioc/epivizrServer

Help Index


Create a new EpivizServer object

Description

Create a new EpivizServer object

Usage

createServer(
  port = 7123L,
  static_site_path = "",
  try_ports = FALSE,
  daemonized = NULL,
  verbose = FALSE,
  non_interactive = FALSE
)

Arguments

port

(int) port to which server will listen to.

static_site_path

(character) path to serve static html files.

try_ports

(logical) try various ports until an open port is found.

daemonized

(logical) run in background using httpuv's daemonized libuv server.

verbose

(logical) print verbose output.

non_interactive

(logical) run in non-interactive mode. For development purposes only.

Value

an EpivizServer object

See Also

EpivizServer for the class of objects returned

Examples

server <- createServer(port=7123,
                       verbose=TRUE
                       )

Class providing WebSocket connection server

Description

Class providing WebSocket connection server

Details

The most important aspect of the API of this server are methods register_action and send_request. These are used to interact with the epiviz JS app through the provided websocket connection. register_action(action, callback) registers a callback function to be executed upon request from the epiviz JS app. When the server receives a JSON message through the websocket, it checks for an action field in the received request message, and then evaluates the expression callback(message_data) where message_data is obtained from the data field in the received message. A response will be sent to the epiviz app with field data populated with the result of the callback. If an error occurs during evaluation of the callback function, the response will be sent with field success set to false.

To send requests to the JS app, method send_request(request_data, callback) should be used. This is sends a request to the JS app with the data field populated with argument request_data. Once a response is received (with field success equal to true) the expression callback(response_data) is evaluated where response_data is obtained from the data field in the received response message.

Value

RC object with methods for communication with epiviz JS app

Methods

has_action(action)

Check if a callback is registered for given action<character>, <logical>. (See Details)

has_request_waiting()

Check if there is a sent request waiting for a response from JS app, <logical>

is_closed()

Check if server is closed, <logical>

is_daemonized()

Check if server is running in background, <logical>

is_interactive()

Check if server is running in interactive mode, <logical>

is_socket_connected()

Check if there is an open websocket connection to JS app, <logical>

register_action(action, callback)

Register a callback<function> to evaluate when epiviz JS sends a request for given action<character>. (See Details)

run_server(...)

Run server in blocking mode

send_request(request_data, callback)

Send request to epiviz JS app with given request_data<list>, and evaluate callback<function> when response arrives. (See Details)

service()

Listen to requests from server. Only has effect when non-daemonized

start_server()

Start the underlying httpuv server, daemonized if applicable

stop_server()

Stop the underlying httpuv server

stop_service()

Stop listenning to requests from server. Only has effect when non-daemonized.

unregister_action(action)

Unregister a callback function for given action<character> (if registered). (See Details)

wait_to_clear_requests(timeout = 3L)

Wait for timeout seconds to clear all pending requests.

Examples

server <- createServer()
server$register_action("getData", function(request_data) {
  list(x=1,y=3)
})

server$start_server()

server$send_request(list(x=2,y=5), function(response_data) {
  cat(response_data$x)
})

server$stop_server()

Class providing an indexed array (hashtable)

Description

Class providing an indexed array (hashtable)

Methods

append(item)

Append item to tail of array, returns id of item <int>

empty()

Remove all items from array

get(id)

Get item with given id<int>, returns <ANY>, returns NULL if no item with given id

length()

Return number of items on array <int>


JSON parser used by this package

Description

Currently this just renames fromJSON in the rjson package.

Usage

json_parser(
  json_str,
  file,
  method = "C",
  unexpected.escape = "error",
  simplify = TRUE
)

Arguments

json_str

json string to parse

file

file to read json_Str from

method

method used to parse json

unexpected.escape

handling escape characters, one of error, skip, keep

simplify

if TRUE, convert json-encoded lists to vectors

Value

a JSON object

See Also

fromJSON


JSON writer used by this package

Description

Currently this just renames toJSON in the rjson package.

Usage

json_writer(x, indent = 0, method = "C")

Arguments

x

object to write to json

indent

integer specifying how much indentation to use when formatting the JSON object; if 0, no pretty-formatting is used

method

method used to write json

Value

a string with JSON encoding of object

See Also

toJSON


Class providing a queue data structure

Description

Class providing a queue data structure

Methods

empty()

Remove all items from queue

has_more()

Return TRUE if there are more items in queue <logical>

length()

Return the number of items in queue <int>

pop()

Pop next item from queue (returns NULL if queue is empty)

push(item)

Push <item> onto queue