NEWS

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edge 2.1.1

• Moderated F-test has been added for likelihood ratio test
• Weights can be inputted into odp/lrt which allows it to work for RNA-Seq experiments with low samples
• added function apply_jackstraw
• fixed bug in build_study

edge 2.0.0

The edge package was first released in 2005 and described in the publication

Jeffrey T. Leek, Eva Monsen, Alan R. Dabney, and John D. Storey. Edge

extraction and analysis of differential gene expression. Bioinformatics

• 22(4):507–508, 2006.

http://bioinformatics.oxfordjournals.org/content/22/4/507.abstract

It was an independently released R package by the John Storey Lab, which

included multi-threading and a graphical user interface. However, edge has been

updated and will now be made available through Bioconductor; edge >=2.0.0 is the

new version released through Bioconductor