{"gene.name":"thrA","gene.annotation":"aspartokinase I/homoserine dehydrogenase I","operon.name":"thr","operon.comments":"threonine biosynthesis"}
{"gene.name":"thrB","gene.annotation":"homoserine kinase","operon.name":"thr","operon.comments":"threonine biosynthesis"}
{"gene.name":"thrC","gene.annotation":"threonine synthase","operon.name":"thr","operon.comments":"threonine biosynthesis"}
{"gene.name":"dnaK","gene.annotation":"DNA biosynthesis; heat shock protein","operon.name":"dnaK","operon.comments":"DNA biosynthesis"}
{"gene.name":"dnaJ","gene.annotation":"DNA biosynthesis; heat shock protein","operon.name":"dnaK","operon.comments":"DNA biosynthesis"}
{"gene.name":"yaaC","gene.annotation":"35K hypothetical","operon.name":"ileS-lsp","operon.comments":"tRNA synthetase & peptidase"}
{"gene.name":"ileS","gene.annotation":"isoleucine tRNA synthetase (EC 6.1.1.5)","operon.name":"ileS-lsp","operon.comments":"tRNA synthetase & peptidase"}
{"gene.name":"lspA","gene.annotation":"prolipoprotein signal peptidase (SPaseII) (EC 3.4 99 35)","operon.name":"ileS-lsp","operon.comments":"tRNA synthetase & peptidase"}
{"gene.name":"carA","gene.annotation":"carbamoyl-phosphate synthetase subunit A","operon.name":"carAB","operon.comments":"carbamoyl-phosphate synthetase"}
{"gene.name":"carB","gene.annotation":"carbamoyl-phosphate synthetase subunit B","operon.name":"carAB","operon.comments":"carbamoyl-phosphate synthetase"}
{"gene.name":"caiT","gene.annotation":"probable carnitine transporter","operon.name":"cai","operon.comments":"probable carnitine operon"}
{"gene.name":"caiA","gene.annotation":"probable carnitine operon oxidoreductase CaiA","operon.name":"cai","operon.comments":"probable carnitine operon"}
{"gene.name":"caiB","gene.annotation":"L-carnitine dehydratase","operon.name":"cai","operon.comments":"probable carnitine operon"}
{"gene.name":"caiC","gene.annotation":"probable crotonobetaine/carnitine-CoA ligase","operon.name":"cai","operon.comments":"probable carnitine operon"}
{"gene.name":"caiD","gene.annotation":"carnitine racemase","operon.name":"cai","operon.comments":"probable carnitine operon"}
{"gene.name":"caiE","gene.annotation":"carnitine operon protein CaiE","operon.name":"cai","operon.comments":"probable carnitine operon"}
{"gene.name":"fixA","gene.annotation":"FixA protein","operon.name":"fix","operon.comments":"may play a role in a redox process"}
{"gene.name":"fixB","gene.annotation":"FixB protein","operon.name":"fix","operon.comments":"may play a role in a redox process"}
{"gene.name":"fixC","gene.annotation":"FixC protein (similar to the ORF at 1784259)","operon.name":"fix","operon.comments":"may play a role in a redox process"}
{"gene.name":"surA","gene.annotation":"peptidyl prolyl isomerase; survival protein SurA precursor","operon.name":"surA-pdxA-ksgA-apaGH","operon.comments":"16S ribosomal RNA modification & chaperone"}
{"gene.name":"pdxA","gene.annotation":"pyridoxine and pyridoxal phosphate biosynthesis","operon.name":"surA-pdxA-ksgA-apaGH","operon.comments":"16S ribosomal RNA modification & chaperone"}
{"gene.name":"ksgA","gene.annotation":"6-m-2-A methyltransferase; put. 16S rRNA methyltransferase","operon.name":"surA-pdxA-ksgA-apaGH","operon.comments":"16S ribosomal RNA modification & chaperone"}
{"gene.name":"apaG","gene.annotation":"ApaG protein","operon.name":"surA-pdxA-ksgA-apaGH","operon.comments":"16S ribosomal RNA modification & chaperone"}
{"gene.name":"apaH","gene.annotation":"diadenosine tetraphosphatase","operon.name":"surA-pdxA-ksgA-apaGH","operon.comments":"16S ribosomal RNA modification & chaperone"}
{"gene.name":"araB","gene.annotation":"L-ribulokinase","operon.name":"araBAD","operon.comments":"arabinose catabolic pathway"}
{"gene.name":"araA","gene.annotation":"L-arabinose isomerase","operon.name":"araBAD","operon.comments":"arabinose catabolic pathway"}
{"gene.name":"araD","gene.annotation":"L-ribulose 5 phosphate 4-epimerase (similar to the ORF at 3744844)","operon.name":"araBAD","operon.comments":"arabinose catabolic pathway"}
{"gene.name":"leuA","gene.annotation":"2-isopropylmalate synthase ;alpha-isopropylmalate synthase","operon.name":"leu","operon.comments":"leucine biosynthesis"}
{"gene.name":"leuB","gene.annotation":"3-isopropylmalate dehydrogenase (EC 1.1.1.85)","operon.name":"leu","operon.comments":"leucine biosynthesis"}
{"gene.name":"leuC","gene.annotation":"3-isopropylmalate dehydratase (EC 4.2.1.33)","operon.name":"leu","operon.comments":"leucine biosynthesis"}
{"gene.name":"leuD","gene.annotation":"3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)","operon.name":"leu","operon.comments":"leucine biosynthesis"}
{"gene.name":"Regulation","gene.annotation":"promoter","operon.name":"ilvIH","operon.comments":"acetolactate synthase III"}
{"gene.name":"ilvI","gene.annotation":"acetolactate synthase III (EC 4.1.3.18), valine sensitive, large subunit","operon.name":"ilvIH","operon.comments":"acetolactate synthase III"}
{"gene.name":"ilvH","gene.annotation":"acetolactate synthase III (EC 4.1.3.18), valine sensitive, small subunit","operon.name":"ilvIH","operon.comments":"acetolactate synthase III"}
{"gene.name":"murG","gene.annotation":"transferase in peptidoglycan synthesis","operon.name":"murGC","operon.comments":"peptidoglycan synthesis"}
{"gene.name":"murC","gene.annotation":"L-alanine-adding enzyme (EC 6.3.2.8)","operon.name":"murGC","operon.comments":"peptidoglycan synthesis"}
{"gene.name":"ddlB","gene.annotation":"(ddl) D-alanine-D-alanine ligase B (EC 6.3.2.4)","operon.name":"murGC","operon.comments":"peptidoglycan synthesis"}
{"gene.name":"ampD","gene.annotation":"AmpD protein; a repressor for ampC transcription","operon.name":"ampDE","operon.comments":"putative signalling protein in beta-lactamase regulation"}
{"gene.name":"ampE","gene.annotation":"AmpE protein","operon.name":"ampDE","operon.comments":"putative signalling protein in beta-lactamase regulation"}
{"gene.name":"aceE","gene.annotation":"pyruvate dehydrogenase (decarboxylase component) (EC 1.2.4.1)","operon.name":"aceEF","operon.comments":"pyruvate dehydrogenase"}
{"gene.name":"aceF","gene.annotation":"pyruvate dehydrogenase (dihydrolipoyltransacetylase component)(EC 2.3.1.12)","operon.name":"aceEF","operon.comments":"pyruvate dehydrogenase"}
{"gene.name":"lpdA","gene.annotation":"(lpd) pyruvate dehydrogenase (lipoamide dehydrogenase)","operon.name":"aceEF","operon.comments":"pyruvate dehydrogenase"}
{"gene.name":"speE","gene.annotation":"spermidine synthase","operon.name":"speED","operon.comments":"biosynthesis of spermidine"}
{"gene.name":"speD","gene.annotation":"adenosylmethionine decarboxylase","operon.name":"speED","operon.comments":"biosynthesis of spermidine"}
{"gene.name":"ecpD","gene.annotation":"periplasmic protein","operon.name":"htrE","operon.comments":"periplasmic protein"}
{"gene.name":"htrE","gene.annotation":"outer membrane usher protein htrE precursor (heat shock protein E)","operon.name":"htrE","operon.comments":"periplasmic protein"}
{"gene.name":"fhuA","gene.annotation":"ferrichrome-iron receptor precursor","operon.name":"fhuACDB","operon.comments":"ferrichrome-iron transport"}
{"gene.name":"fhuC","gene.annotation":"ferrichrome-iron transport protein","operon.name":"fhuACDB","operon.comments":"ferrichrome-iron transport"}
{"gene.name":"fhuD","gene.annotation":"ferrichrome-iron transport protein","operon.name":"fhuACDB","operon.comments":"ferrichrome-iron transport"}
{"gene.name":"fhuB","gene.annotation":"ferrichrome-iron transport protein","operon.name":"fhuACDB","operon.comments":"ferrichrome-iron transport"}
{"gene.name":"rpsB","gene.annotation":"ribosomal protein S2","operon.name":"rpsB","operon.comments":"ribosomal-protein"}
{"gene.name":"tsf","gene.annotation":"translation elongation factor EF-Ts","operon.name":"rpsB","operon.comments":"ribosomal-protein"}
{"gene.name":"pyrH","gene.annotation":"uridylate kinase","operon.name":"rpsB","operon.comments":"ribosomal-protein"}
{"gene.name":"frr","gene.annotation":"ribosome releasing factor operon?","operon.name":"rpsB","operon.comments":"ribosomal-protein"}
{"gene.name":"lpxD","gene.annotation":"UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase","operon.name":"lpx","operon.comments":"lipid biosynthesis"}
{"gene.name":"fabZ","gene.annotation":"(3R)-hydroxymyristol acyl carrier protein dehydrase","operon.name":"lpx","operon.comments":"lipid biosynthesis"}
{"gene.name":"lpxA","gene.annotation":"acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase","operon.name":"lpx","operon.comments":"lipid biosynthesis"}
{"gene.name":"lpxB","gene.annotation":"lipid-A-disaccharide synthase","operon.name":"lpx","operon.comments":"lipid biosynthesis"}
{"gene.name":"rnhB","gene.annotation":"ribonuclease H II","operon.name":"lpx","operon.comments":"lipid biosynthesis"}
{"gene.name":"dnaE","gene.annotation":"DNA polymerase III, alpha chain","operon.name":"lpx","operon.comments":"lipid biosynthesis"}
{"gene.name":"accA","gene.annotation":"acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha","operon.name":"lpx","operon.comments":"lipid biosynthesis"}
{"gene.name":"proB","gene.annotation":"gamma-glutamate kinase (EC 2.7.2.11)","operon.name":"proBA","operon.comments":"proline biosynthesis"}
{"gene.name":"proA","gene.annotation":"gamma-glutamylphosphate reductase (EC 1.2.1.41)","operon.name":"proBA","operon.comments":"proline biosynthesis"}
{"gene.name":"Regulation","gene.annotation":"promoter","operon.name":"codBA","operon.comments":"cytosine transport"}
{"gene.name":"codB","gene.annotation":"cytosine transport protein","operon.name":"codBA","operon.comments":"cytosine transport"}
{"gene.name":"codA","gene.annotation":"cytosine deaminase","operon.name":"codBA","operon.comments":"cytosine transport"}
{"gene.name":"cynT","gene.annotation":"carbonic anhydrase (EC 4.2.1.1)","operon.name":"cynTSX","operon.comments":"cyanate utilization"}
{"gene.name":"cynS","gene.annotation":"cyanate aminohydrolase (EC 3.5.5.3), cyanase","operon.name":"cynTSX","operon.comments":"cyanate utilization"}
{"gene.name":"cynX","gene.annotation":"cyanate transport protein cynX","operon.name":"cynTSX","operon.comments":"cyanate utilization"}
{"gene.name":"lacZ","gene.annotation":"beta-D-galactosidase (EC 3.2.1.23)","operon.name":"lac","operon.comments":"galactoside utilization"}
{"gene.name":"lacY","gene.annotation":"galactoside permease (M protein)","operon.name":"lac","operon.comments":"galactoside utilization"}
{"gene.name":"lacA","gene.annotation":"galactoside acetyltransferase (EC 2.3.1.18)","operon.name":"lac","operon.comments":"galactoside utilization"}
{"gene.name":"339","gene.annotation":"(mhpA) 3-(3-hydroxy-phenyl)propionate hydroxylase (EC 1.14.13.-)","operon.name":"mhp","operon.comments":"catechol dioxygenases"}
{"gene.name":"mhpB","gene.annotation":"2,3-dihydroxyphenylpropionate 1,2-dioxygenase","operon.name":"mhp","operon.comments":"catechol dioxygenases"}
{"gene.name":"341","gene.annotation":"(mhpC) 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase (EC 3.7.1.-)","operon.name":"mhp","operon.comments":"catechol dioxygenases"}
{"gene.name":"342","gene.annotation":"(mhpD) 2-keto-4-pentenoate hydratase (EC 4.2.-.-)","operon.name":"mhp","operon.comments":"catechol dioxygenases"}
{"gene.name":"mhpE","gene.annotation":"4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-) (HOA)","operon.name":"mhp","operon.comments":"catechol dioxygenases"}
{"gene.name":"344","gene.annotation":"(mhpF) acetaldehyde dehydrogenase (EC 1.2.1.10)","operon.name":"mhp","operon.comments":"catechol dioxygenases"}
{"gene.name":"phoB","gene.annotation":"phosphate regulon transcriptional regulatory protein","operon.name":"phoBR","operon.comments":"positive regulator for the phosphate regulon"}
{"gene.name":"phoR","gene.annotation":"phosphate regulon sensor protein phoR","operon.name":"phoBR","operon.comments":"positive regulator for the phosphate regulon"}
{"gene.name":"queA","gene.annotation":"S-adenosylmethionine:tRNA ribosyltransferase-isomerase","operon.name":"secD","operon.comments":"tRNA modification & protein export"}
{"gene.name":"tgt","gene.annotation":"queuine tRNA-ribosyltransferase (EC 2.4.2.29)","operon.name":"secD","operon.comments":"tRNA modification & protein export"}
{"gene.name":"yajC","gene.annotation":"","operon.name":"secD","operon.comments":"tRNA modification & protein export"}
{"gene.name":"secD","gene.annotation":"protein-export membrane protein SecD","operon.name":"secD","operon.comments":"tRNA modification & protein export"}
{"gene.name":"secF","gene.annotation":"protein-export membrane protein SecF","operon.name":"secD","operon.comments":"tRNA modification & protein export"}
{"gene.name":"cyoA","gene.annotation":"cytochrome o ubiquinol oxidase subunit 11 (EC 1,10,3,-)","operon.name":"cyoABCDE","operon.comments":"cytochrome o ubiquinol oxidase"}
{"gene.name":"cyoB","gene.annotation":"cytochrome o ubiquinol oxidase subunit I (EC 1,10,3,-)","operon.name":"cyoABCDE","operon.comments":"cytochrome o ubiquinol oxidase"}
{"gene.name":"cyoC","gene.annotation":"cytochrome o ubiquinol oxidase subunit 111 (EC 1,10,3,-)","operon.name":"cyoABCDE","operon.comments":"cytochrome o ubiquinol oxidase"}
{"gene.name":"cyoD","gene.annotation":"cytochrome o ubiquinol oxidase operon protein CyoD","operon.name":"cyoABCDE","operon.comments":"cytochrome o ubiquinol oxidase"}
{"gene.name":"cyoE","gene.annotation":"cytochrome o ubiquinol oxidase operon protein CyoE","operon.name":"cyoABCDE","operon.comments":"cytochrome o ubiquinol oxidase"}
{"gene.name":"clpP","gene.annotation":"ATP-dependent clp protease proteolytic subunit","operon.name":"clpPX","operon.comments":"clp protease"}
{"gene.name":"clpX","gene.annotation":"ATP-dependent protease ATPase subunit","operon.name":"clpPX","operon.comments":"clp protease"}
{"gene.name":"Regulation","gene.annotation":"terminator","operon.name":"clpPX","operon.comments":"clp protease"}
{"gene.name":"acrA","gene.annotation":"resistance to acriflavine, hydrophobic anibiotics, basic dyes, and detergents","operon.name":"acrAB","operon.comments":"resistance to acriflavine"}
{"gene.name":"acrB","gene.annotation":"resistance to acriflavine, hydrophobic anibiotics, basic dyes, and detergents","operon.name":"acrAB","operon.comments":"resistance to acriflavine"}
{"gene.name":"ybaB","gene.annotation":"hypothetical 12.0 kD protein","operon.name":"recR","operon.comments":"DNA recombination"}
{"gene.name":"recR","gene.annotation":"recombination protein RecR","operon.name":"recR","operon.comments":"DNA recombination"}
{"gene.name":"purE","gene.annotation":"phosphoribosylaminoimidazole carboxylase catalytic chain","operon.name":"purEK","operon.comments":"phosphoribosylaminoimidazole carboxylase"}
{"gene.name":"purK","gene.annotation":"phosphoribosylaminoimidazole carboxylase ATPase subunit","operon.name":"purEK","operon.comments":"phosphoribosylaminoimidazole carboxylase"}
{"gene.name":"561","gene.annotation":"(copR) sensor","operon.name":"copRS","operon.comments":"two-component system"}
{"gene.name":"560","gene.annotation":"(copS) activator","operon.name":"copRS","operon.comments":"two-component system"}
{"gene.name":"fepD","gene.annotation":"ferric enterobactin (enterochelin) uptake","operon.name":"fepDGC","operon.comments":"ferric enterobactin uptake"}
{"gene.name":"fepG","gene.annotation":"ferric enterobactin transport protein","operon.name":"fepDGC","operon.comments":"ferric enterobactin uptake"}
{"gene.name":"fepC","gene.annotation":"ferric enterobactin (enterochelin) uptake; cytoplasmic membrane component","operon.name":"fepDGC","operon.comments":"ferric enterobactin uptake"}
{"gene.name":"entC","gene.annotation":"isochorismate synthase","operon.name":"entCEBA","operon.comments":"enterobactin biosynthesis"}
{"gene.name":"entE","gene.annotation":"enterochelin synthetase component E","operon.name":"entCEBA","operon.comments":"enterobactin biosynthesis"}
{"gene.name":"entB","gene.annotation":"isochorismatase (2,3-dihydro-2,3-dihydroxybenzoate synthase)","operon.name":"entCEBA","operon.comments":"enterobactin biosynthesis"}
{"gene.name":"entA","gene.annotation":"2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase","operon.name":"entCEBA","operon.comments":"enterobactin biosynthesis"}
{"gene.name":"mrdA","gene.annotation":"(pbpA) penicillin-binding protein 2","operon.name":"mrdAB","operon.comments":"responsible for the rod shape"}
{"gene.name":"mrdB","gene.annotation":"(rodA) rod-shape-determining protein","operon.name":"mrdAB","operon.comments":"responsible for the rod shape"}
{"gene.name":"gltJ","gene.annotation":"glutamate/aspartate transport system permease","operon.name":"gltJKL","operon.comments":"glutamate/aspartate transport"}
{"gene.name":"gltK","gene.annotation":"glutamate/aspartate transport system permease","operon.name":"gltJKL","operon.comments":"glutamate/aspartate transport"}
{"gene.name":"gltL","gene.annotation":"glutamate/aspartate transport ATP-binding protein","operon.name":"gltJKL","operon.comments":"glutamate/aspartate transport"}
{"gene.name":"nagB","gene.annotation":"glucosamine-6-phosphate deaminase (EC 5.3.1.10)","operon.name":"nagBACD","operon.comments":"N-acetylglucosamine uptake"}
{"gene.name":"nagA","gene.annotation":"N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)","operon.name":"nagBACD","operon.comments":"N-acetylglucosamine uptake"}
{"gene.name":"nagC","gene.annotation":"repressor for the nag regulon","operon.name":"nagBACD","operon.comments":"N-acetylglucosamine uptake"}
{"gene.name":"nagD","gene.annotation":"","operon.name":"nagBACD","operon.comments":"N-acetylglucosamine uptake"}
{"gene.name":"speF","gene.annotation":"ornithine decarboxylase, inducible","operon.name":"speFpotE","operon.comments":"ornithine uptake"}
{"gene.name":"potE","gene.annotation":"putrescine-ornithine antiporter","operon.name":"speFpotE","operon.comments":"ornithine uptake"}
{"gene.name":"kdpA","gene.annotation":"","operon.name":"kdpABC","operon.comments":"membrane K transport ATPases"}
{"gene.name":"kdpB","gene.annotation":"","operon.name":"kdpABC","operon.comments":"membrane K transport ATPases"}
{"gene.name":"kdpC","gene.annotation":"","operon.name":"kdpABC","operon.comments":"membrane K transport ATPases"}
{"gene.name":"kdpD","gene.annotation":"transmembrane protein","operon.name":"kdpABC","operon.comments":"membrane K transport ATPases"}
{"gene.name":"kdpE","gene.annotation":"cytoplasmic protein (similar to the ORF at 717096 in part)","operon.name":"kdpABC","operon.comments":"membrane K transport ATPases"}
{"gene.name":"sdhC","gene.annotation":"succinate dehydrogenase (EC 1.3.99.1), cytochrome b556","operon.name":"sdhCDAB","operon.comments":"succinate dehydrogenase"}
{"gene.name":"sdhD","gene.annotation":"succinate dehydrogenase (EC 1.3.99.1), hydrophobic subunit","operon.name":"sdhCDAB","operon.comments":"succinate dehydrogenase"}
{"gene.name":"sdhA","gene.annotation":"succinate dehydrogenase (EC 1.3.99.1), flavoprotein subunit","operon.name":"sdhCDAB","operon.comments":"succinate dehydrogenase"}
{"gene.name":"sdhB","gene.annotation":"succinate dehydrogenase (EC 1.3.99.1), iron sulfur protein","operon.name":"sdhCDAB","operon.comments":"succinate dehydrogenase"}
{"gene.name":"sucA","gene.annotation":"2-0xoglutarate dehydrogenase complex (decarboxylase component) (EC 1.2.4.2)","operon.name":"sucABCD","operon.comments":"TCA cycle"}
{"gene.name":"sucB","gene.annotation":"2-0xoglutarate dehydrogenase complex (dihydrolipoyl transsuccinase component) (EC 2.3.1.61)","operon.name":"sucABCD","operon.comments":"TCA cycle"}
{"gene.name":"sucC","gene.annotation":"succinyl-CoA synthetase (EC 6.2.1.5), beta subunit","operon.name":"sucABCD","operon.comments":"TCA cycle"}
{"gene.name":"sucD","gene.annotation":"succinyl-CoA synthetase (EC 6.2.1.5), alpha subunit","operon.name":"sucABCD","operon.comments":"TCA cycle"}
{"gene.name":"cydA","gene.annotation":"cytochrome oxidase d subunit I","operon.name":"cyd","operon.comments":"cytochrome d oxidase subunits I and II"}
{"gene.name":"cydB","gene.annotation":"cytochrome oxidase d subunit II","operon.name":"cyd","operon.comments":"cytochrome d oxidase subunits I and II"}
{"gene.name":"tolQ","gene.annotation":"membrane toporogy","operon.name":"tolQRA","operon.comments":"colicin uptake"}
{"gene.name":"tolR","gene.annotation":"","operon.name":"tolQRA","operon.comments":"colicin uptake"}
{"gene.name":"tolA","gene.annotation":"","operon.name":"tolQRA","operon.comments":"colicin uptake"}
{"gene.name":"tolB","gene.annotation":"","operon.name":"tolQRA","operon.comments":"colicin uptake"}
{"gene.name":"galE","gene.annotation":"UDP-galactose 4-epimerase (5.1.3.2)","operon.name":"gal","operon.comments":"galactose metabolism"}
{"gene.name":"galT","gene.annotation":"galactose-l-phosphate uridylyltransferase (EC 2.7.7.10)","operon.name":"gal","operon.comments":"galactose metabolism"}
{"gene.name":"galK","gene.annotation":"galactokinase (EC 2.7.1.6)","operon.name":"gal","operon.comments":"galactose metabolism"}
{"gene.name":"galM","gene.annotation":"mutarotase","operon.name":"gal","operon.comments":"galactose metabolism"}
{"gene.name":"modA","gene.annotation":"molybdate-binding periplasmic protein","operon.name":"modABC","operon.comments":"molybdate transport"}
{"gene.name":"modB","gene.annotation":"molybdenum transport system permease","operon.name":"modABC","operon.comments":"molybdate transport"}
{"gene.name":"modC","gene.annotation":"molybdenum transport ATP binding","operon.name":"modABC","operon.comments":"molybdate transport"}
{"gene.name":"Regulation","gene.annotation":"biotin operon promoter","operon.name":"bioBFCD","operon.comments":"biotin biosynthesis"}
{"gene.name":"bioB","gene.annotation":"(bioH) biotin synthetase","operon.name":"bioBFCD","operon.comments":"biotin biosynthesis"}
{"gene.name":"bioF","gene.annotation":"7-keto-8-aminopelargonic acid synthetase (EC 2.3.1.47)","operon.name":"bioBFCD","operon.comments":"biotin biosynthesis"}
{"gene.name":"bioC","gene.annotation":"biotin biosynthesis; reaction prior to pimeloyl-CoA","operon.name":"bioBFCD","operon.comments":"biotin biosynthesis"}
{"gene.name":"bioD","gene.annotation":"dethiobiotin synthetase (EC 6.3.3.3)","operon.name":"bioBFCD","operon.comments":"biotin biosynthesis"}
{"gene.name":"moaA","gene.annotation":"molybdenum cofactor biosynthesis protein A","operon.name":"moaABCDE","operon.comments":"molybdenum cofactor biosynthesis"}
{"gene.name":"moaB","gene.annotation":"","operon.name":"moaABCDE","operon.comments":"molybdenum cofactor biosynthesis"}
{"gene.name":"moaC","gene.annotation":"","operon.name":"moaABCDE","operon.comments":"molybdenum cofactor biosynthesis"}
{"gene.name":"moaD","gene.annotation":"molybdopterin-converting factor subunit 1","operon.name":"moaABCDE","operon.comments":"molybdenum cofactor biosynthesis"}
{"gene.name":"moaE","gene.annotation":"molybdopterin-converting factor 16K chain","operon.name":"moaABCDE","operon.comments":"molybdenum cofactor biosynthesis"}
{"gene.name":"glnH","gene.annotation":"periplasmic glutamine-binding protein","operon.name":"glnHPQ","operon.comments":"glutamine transport"}
{"gene.name":"glnP","gene.annotation":"glutamine high-affinity transport system; membrane component","operon.name":"glnHPQ","operon.comments":"glutamine transport"}
{"gene.name":"glnQ","gene.annotation":"glutamine high-affinity transport system","operon.name":"glnHPQ","operon.comments":"glutamine transport"}
{"gene.name":"moeA","gene.annotation":"molybdopterin biosynthesis","operon.name":"moeAB","operon.comments":"molybdopterin biosynthesi"}
{"gene.name":"moeB","gene.annotation":"molybdopterin biosynthesis","operon.name":"moeAB","operon.comments":"molybdopterin biosynthesi"}
{"gene.name":"potF","gene.annotation":"putrescine-binding periplasmic protein","operon.name":"potFGHI","operon.comments":"putrescine transport"}
{"gene.name":"potG","gene.annotation":"","operon.name":"potFGHI","operon.comments":"putrescine transport"}
{"gene.name":"potH","gene.annotation":"transmembrane protein","operon.name":"potFGHI","operon.comments":"putrescine transport"}
{"gene.name":"potI","gene.annotation":"transmembrane protein","operon.name":"potFGHI","operon.comments":"putrescine transport"}
{"gene.name":"artP","gene.annotation":"arginine transport ATP-binding protein","operon.name":"artPIQMJ","operon.comments":"arginine transport"}
{"gene.name":"artI","gene.annotation":"arginine binding periplasmic protein 1","operon.name":"artPIQMJ","operon.comments":"arginine transport"}
{"gene.name":"artQ","gene.annotation":"arginine transport system permease","operon.name":"artPIQMJ","operon.comments":"arginine transport"}
{"gene.name":"artM","gene.annotation":"arginine transport system permease","operon.name":"artPIQMJ","operon.comments":"arginine transport"}
{"gene.name":"artJ","gene.annotation":"arginine binding periplasmic protein 2","operon.name":"artPIQMJ","operon.comments":"arginine transport"}
{"gene.name":"dmsA","gene.annotation":"anaerobic dimethyl sulfoxide reductase chain A","operon.name":"dmsABC","operon.comments":"dimethyl sulfoxide reductase"}
{"gene.name":"dmsB","gene.annotation":"anaerobic dimethyl sulfoxide reductase chain B","operon.name":"dmsABC","operon.comments":"dimethyl sulfoxide reductase"}
{"gene.name":"dmsC","gene.annotation":"anaerobic dimethyl sulfoxide reductase chain C","operon.name":"dmsABC","operon.comments":"dimethyl sulfoxide reductase"}
{"gene.name":"cmk","gene.annotation":"cytidine monophosphate kinase","operon.name":"rpsA","operon.comments":"ribosomal protein"}
{"gene.name":"rpsA","gene.annotation":"ribosomal protein S1","operon.name":"rpsA","operon.comments":"ribosomal protein"}
{"gene.name":"smtA","gene.annotation":"smtA protein","operon.name":"smtAmukFEB","operon.comments":"cell division"}
{"gene.name":"mukF","gene.annotation":"(kicB) killing factor MukF","operon.name":"smtAmukFEB","operon.comments":"cell division"}
{"gene.name":"mukE","gene.annotation":"(kicA) MukE protein","operon.name":"smtAmukFEB","operon.comments":"cell division"}
{"gene.name":"mukB","gene.annotation":"cell division protein MukB","operon.name":"smtAmukFEB","operon.comments":"cell division"}
{"gene.name":"pqiA","gene.annotation":"paraquat-inducible protein A","operon.name":"pqiAB","operon.comments":"paraquat, a superoxide radical-generating agent inducible"}
{"gene.name":"pqiB","gene.annotation":"paraquat-inducible protein B","operon.name":"pqiAB","operon.comments":"paraquat, a superoxide radical-generating agent inducible"}
{"gene.name":"hyaA","gene.annotation":"hydrogenase-1 small chain precursor","operon.name":"hya","operon.comments":"hydrogenase-1"}
{"gene.name":"hyaB","gene.annotation":"hydrogenase-1 large chain","operon.name":"hya","operon.comments":"hydrogenase-1"}
{"gene.name":"hyaC","gene.annotation":"HyaC protein","operon.name":"hya","operon.comments":"hydrogenase-1"}
{"gene.name":"hyaD","gene.annotation":"hydrogenase-1 operon protein HyaD","operon.name":"hya","operon.comments":"hydrogenase-1"}
{"gene.name":"hyaE","gene.annotation":"hydrogenase-1 operon protein HyaE","operon.name":"hya","operon.comments":"hydrogenase-1"}
{"gene.name":"hyaF","gene.annotation":"hydrogenase-1 operon protein HyaF","operon.name":"hya","operon.comments":"hydrogenase-1"}
{"gene.name":"Regulation","gene.annotation":"controled by appR (katF)","operon.name":"appCBA","operon.comments":"cytochrome bd terminal oxidase; stationary phase"}
{"gene.name":"appC","gene.annotation":"cytochrome bd-II oxidase subunit I","operon.name":"appCBA","operon.comments":"cytochrome bd terminal oxidase; stationary phase"}
{"gene.name":"appB","gene.annotation":"cytochrome bd-II oxidase subunit II","operon.name":"appCBA","operon.comments":"cytochrome bd terminal oxidase; stationary phase"}
{"gene.name":"appA","gene.annotation":"periplasmic phosphoanhydride phosphohydrolase precursor","operon.name":"appCBA","operon.comments":"cytochrome bd terminal oxidase; stationary phase"}
{"gene.name":"torC","gene.annotation":"cytochrome c-type protein TorC","operon.name":"torCAD","operon.comments":"part of the respiratory chain of trimethylamine-n-oxide reductase"}
{"gene.name":"torA","gene.annotation":"trimethylamine-N-oxide reductase precursor","operon.name":"torCAD","operon.comments":"part of the respiratory chain of trimethylamine-n-oxide reductase"}
{"gene.name":"torD","gene.annotation":"TorD protein","operon.name":"torCAD","operon.comments":"part of the respiratory chain of trimethylamine-n-oxide reductase"}
{"gene.name":"csgD","gene.annotation":"putative regulatory protein necessary for transcription of the csgBA","operon.name":"csgDEFG","operon.comments":"curli"}
{"gene.name":"csgE","gene.annotation":"assembly/transport component in curli","operon.name":"csgDEFG","operon.comments":"curli"}
{"gene.name":"csgF","gene.annotation":"assembly/transport component in curli","operon.name":"csgDEFG","operon.comments":"curli"}
{"gene.name":"csgG","gene.annotation":"assembly/transport component in curli","operon.name":"csgDEFG","operon.comments":"curli"}
{"gene.name":"csgB","gene.annotation":"nucleation component of curlin monomers","operon.name":"csgBA","operon.comments":"curlin"}
{"gene.name":"csgA","gene.annotation":"major curlin subunit precursor","operon.name":"csgBA","operon.comments":"curlin"}
{"gene.name":"mdoG","gene.annotation":"periplasmic glucans biosynthesis protein MdoG","operon.name":"mdoGH","operon.comments":"biosynthesis of periplasmic membrane-derived oligosaccharides"}
{"gene.name":"mdoH","gene.annotation":"periplasmic glucans biosynthesis protein MdoH","operon.name":"mdoGH","operon.comments":"biosynthesis of periplasmic membrane-derived oligosaccharides"}
{"gene.name":"flgA","gene.annotation":"","operon.name":"flgAMN","operon.comments":"flagellar biosynthesis"}
{"gene.name":"flgM","gene.annotation":"","operon.name":"flgAMN","operon.comments":"flagellar biosynthesis"}
{"gene.name":"flgN","gene.annotation":"","operon.name":"flgAMN","operon.comments":"flagellar biosynthesis"}
{"gene.name":"flgB","gene.annotation":"(flbA) putative flagellar basal-body rod protein FlgB (proximal rod protein)","operon.name":"flgBCDEFGHI","operon.comments":"flagellar biosynthesis"}
{"gene.name":"flgC","gene.annotation":"(flaW) putative flagellar basal-body rod protein FlgC (proximal rod protein)","operon.name":"flgBCDEFGHI","operon.comments":"flagellar biosynthesis"}
{"gene.name":"flgD","gene.annotation":"(flaV) flagellar biosynthesis, initiation of hook assembly","operon.name":"flgBCDEFGHI","operon.comments":"flagellar biosynthesis"}
{"gene.name":"flgE","gene.annotation":"(flaK) flagellar biosynthesis, hook protein","operon.name":"flgBCDEFGHI","operon.comments":"flagellar biosynthesis"}
{"gene.name":"flgF","gene.annotation":"(flaX) flagellar biosynthesis, cell-proximal portion of basal-body rod","operon.name":"flgBCDEFGHI","operon.comments":"flagellar biosynthesis"}
{"gene.name":"flgG","gene.annotation":"(flaL) flagellar biosynthesis, cell-distal portion of basal-body rod","operon.name":"flgBCDEFGHI","operon.comments":"flagellar biosynthesis"}
{"gene.name":"flgH","gene.annotation":"(flaY) flagellar biosynthesis, basal-body outer membrane L (lipopolysaccharide layer) ring protein","operon.name":"flgBCDEFGHI","operon.comments":"flagellar biosynthesis"}
{"gene.name":"flgI","gene.annotation":"(flaM) flagellar biosynthesis, basal-body periplasmic P ring protein","operon.name":"flgBCDEFGHI","operon.comments":"flagellar biosynthesis"}
{"gene.name":"flgK","gene.annotation":"(flaS) flagellar biosynthesis; hook-filament junction protein","operon.name":"flgKL","operon.comments":"flagellar biosynthesis"}
{"gene.name":"flgL","gene.annotation":"(flaT) flagellar biosynthesis; hook-filament junction protein","operon.name":"flgKL","operon.comments":"flagellar biosynthesis"}
{"gene.name":"yceD","gene.annotation":"g30k protein","operon.name":"rpmF","operon.comments":"ribosomal protein"}
{"gene.name":"rpmF","gene.annotation":"ribosomal protein L32","operon.name":"rpmF","operon.comments":"ribosomal protein"}
{"gene.name":"fabD","gene.annotation":"malonyl CoA-acyl carrier protein transacylase","operon.name":"fabDGacpP","operon.comments":"fatty acid biosynthesis"}
{"gene.name":"fabG","gene.annotation":"3-ketoacyl-acyl carrier protein reductase","operon.name":"fabDGacpP","operon.comments":"fatty acid biosynthesis"}
{"gene.name":"acpP","gene.annotation":"acyl carrier protein","operon.name":"fabDGacpP","operon.comments":"fatty acid biosynthesis"}
{"gene.name":"phoP","gene.annotation":"regulator","operon.name":"phoPQ","operon.comments":"two-component system"}
{"gene.name":"phoQ","gene.annotation":"sensor","operon.name":"phoPQ","operon.comments":"two-component system"}
{"gene.name":"umuD","gene.annotation":"","operon.name":"umuDC","operon.comments":"SOS response"}
{"gene.name":"umuC","gene.annotation":"","operon.name":"umuDC","operon.comments":"SOS response"}
{"gene.name":"dadA","gene.annotation":"D-amino acid dehydrogenase minor subunit","operon.name":"dadAX","operon.comments":"smaller subunit of D-amino acid dehydrogenase"}
{"gene.name":"dadX","gene.annotation":"catabolic alanine racemase","operon.name":"dadAX","operon.comments":"smaller subunit of D-amino acid dehydrogenase"}
{"gene.name":"hemA","gene.annotation":"delta-aminolevulinate synthase glutamyl-tRNA reductase","operon.name":"kdsA","operon.comments":"3-deoxy-D-manno-octulosonic acid metabolism and biosynthesis of enterobacterial lipopolysaccharide"}
{"gene.name":"prfA","gene.annotation":"peptide chain release factor 1","operon.name":"kdsA","operon.comments":"3-deoxy-D-manno-octulosonic acid metabolism and biosynthesis of enterobacterial lipopolysaccharide"}
{"gene.name":"hemK","gene.annotation":"possible protoporphyrinogen oxidase","operon.name":"kdsA","operon.comments":"3-deoxy-D-manno-octulosonic acid metabolism and biosynthesis of enterobacterial lipopolysaccharide"}
{"gene.name":"1186","gene.annotation":"o130","operon.name":"kdsA","operon.comments":"3-deoxy-D-manno-octulosonic acid metabolism and biosynthesis of enterobacterial lipopolysaccharide"}
{"gene.name":"ychA","gene.annotation":"hypothetical protein","operon.name":"kdsA","operon.comments":"3-deoxy-D-manno-octulosonic acid metabolism and biosynthesis of enterobacterial lipopolysaccharide"}
{"gene.name":"kdsA ","gene.annotation":"3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase","operon.name":"kdsA","operon.comments":"3-deoxy-D-manno-octulosonic acid metabolism and biosynthesis of enterobacterial lipopolysaccharide"}
{"gene.name":"narX","gene.annotation":"nitrate/nitrite sensor protein narX","operon.name":"narXL","operon.comments":"two-compoment system"}
{"gene.name":"narL","gene.annotation":"nitrate/nitrite response regulator protein narL","operon.name":"narXL","operon.comments":"two-compoment system"}
{"gene.name":"narG","gene.annotation":"nitrate reductase alpha-subunit precursor","operon.name":"narGHJI","operon.comments":"nitrate reductase"}
{"gene.name":"narH","gene.annotation":"respiratory nitrate reductase 1 beta chain","operon.name":"narGHJI","operon.comments":"nitrate reductase"}
{"gene.name":"narJ","gene.annotation":"respiratory nitrate reductase 1 delta chain","operon.name":"narGHJI","operon.comments":"nitrate reductase"}
{"gene.name":"narI","gene.annotation":"respiratory nitrate reductase 1 gamma chain","operon.name":"narGHJI","operon.comments":"nitrate reductase"}
{"gene.name":"oppA","gene.annotation":"periplasmic oligopeptide binding protein","operon.name":"oppABCDF","operon.comments":"oligopeptide transport"}
{"gene.name":"oppB","gene.annotation":"oligopeptide transport system permease protein","operon.name":"oppABCDF","operon.comments":"oligopeptide transport"}
{"gene.name":"oppC","gene.annotation":"oligopeptide transport system permease protein","operon.name":"oppABCDF","operon.comments":"oligopeptide transport"}
{"gene.name":"oppD","gene.annotation":"oligopeptide transport ATP-binding protein","operon.name":"oppABCDF","operon.comments":"oligopeptide transport"}
{"gene.name":"oppF","gene.annotation":"oligopeptide transport ATP-binding protein","operon.name":"oppABCDF","operon.comments":"oligopeptide transport"}
{"gene.name":"trpE","gene.annotation":"anthranilate synthase component I (EC 4.1.3.27)","operon.name":"trp","operon.comments":"tryptophan biosynthesis"}
{"gene.name":"trpD","gene.annotation":"glutamine amidotransferase (EC 4.1.3.27) and phosphoribosylanthranilate transferase (EC 2.4.2.18)","operon.name":"trp","operon.comments":"tryptophan biosynthesis"}
{"gene.name":"trpC","gene.annotation":"N-(5-phosphoribosyl)anthranilate isomerase (EC 5.3.1.24) and indole-3-glycerolphosphate synthetase (EC 4.1.1.48)","operon.name":"trp","operon.comments":"tryptophan biosynthesis"}
{"gene.name":"trpB","gene.annotation":"tryptophan synthase (EC 4.2.1.20), B protein","operon.name":"trp","operon.comments":"tryptophan biosynthesis"}
{"gene.name":"trpA","gene.annotation":"tryptophan synthase (EC 4.2.1.20), A protein","operon.name":"trp","operon.comments":"tryptophan biosynthesis"}
{"gene.name":"pyrF","gene.annotation":"orotidine 5 monophosphate (OMP) decarboxylase\tpyrF\tOMP decarboxylase\nyciH\thypothetical 11.4 kD protein\tpyrF\tOMP decarboxylase\nsapA\tpeptide transport periplasmic protein SapA\tsap\tpeptide uptake\nsapB\tpeptide transport system permease protein SapB\tsap\tpeptide uptake\nsapC\tpeptide transport system permease protein SapC\tsap\tpeptide uptake\nsapD\tpeptide transport system atp-binding protein SapD\tsap\tpeptide uptake\nsapF\tpeptide transport system ATP-binding protein SapF\tsap\tpeptide uptake\npspA\tshock protein, associated with inner membrane\tpspABCDE\tphage shock protein\npspB\tshock protein B\tpspABCDE\tphage shock protein\npspC\tshock protein activates psp operon expression\tpspABCDE\tphage shock protein\npspD\tshock protein D\tpspABCDE\tphage shock protein\npspE\tshock protein E\tpspABCDE\tphage shock protein\ntehA\ttellurite resistance protein TehA\ttehAB\tpotassium tellurite resistance\ntehB\ttellurite resistance protein TehB\ttehAB\tpotassium tellurite resistance\nnarZ\tsecond nitrate reductase subunit\tnarZYWV\tnitrate reductase\nnarY\t\tnarZYWV\tnitrate reductase\nnarW\t\tnarZYWV\tnitrate reductase\nnarV\t\tnarZYWV\tnitrate reductase\nfdnG\tformate dehydrogenase nitrate-inducible major subunit\tfdnGHI\tformate dehydrogenase\nfdnH\tformate dehydrogenase nitrate-inducible beta subunit\tfdnGHI\tformate dehydrogenase\nfdnI\tformate dehydrogenase nitrate-inducible cytochrome b556 subunit\tfdnGHI\tformate dehydrogenase\nhipB\tHipB protein\thip\thigh-frequency persistence to the lethal effects\nhipA\tHipA protein\thip\thigh-frequency persistence to the lethal effects\nmarR\tmultiple antibiotic resistance protein MarR\tmarRAB\tantibiotic resistance and oxidative stress genes\nmarA\tmultiple antibiotic resistance protein MarA\tmarRAB\tantibiotic resistance and oxidative stress genes\nmarB\tmultiple antibiotic resistance protein MarB\tmarRAB\tantibiotic resistance and oxidative stress genes\nRegulation\ttranscription start; similar to phage P22 immC sequence\tdicB\tcell division control\nydfA\thypothetical 5.8 kD protein\tdicB\tcell division control\nydfB\t\tdicB\tcell division control\nydfC\thypothetical 8.3 kD protein\tdicB\tcell division control\ndicB\tcell division inhibitor\tdicB\tcell division control\nydfD\thypothetical 6.8 kD protein\tdicB\tcell division control\nydfE\t35 kD YdfE\tdicB\tcell division control\nrstA\t(urpT) response regulator homolog\trst\t(urp) two-component system\nrstB\t(uspT) sensor kinase homolog\trst\t(urp) two-component system\nuidA\t(gusA) glucuronidase\tuidABC\tbeta-glucuronidase\nuidB\t(gusB) glucuronide permease\tuidABC\tbeta-glucuronidase\ngusC\t(uidC) membrane-associated protein\tuidABC\tbeta-glucuronidase\nmalX\tphosphotransferase system enzyme II\tmalXY\tmaltose metabolism\nmalY\tabolishing the endogenous induction of the maltose system\tmalXY\tmaltose metabolism\npdxH\tpyridoxamine 5-phosphate oxidase","operon.name":"pdxH-tyrS","operon.comments":"tRNA synthetase & oxidase"}
{"gene.name":"tyrS","gene.annotation":"transfer RNA-Tyr synthetase","operon.name":"pdxH-tyrS","operon.comments":"tRNA synthetase & oxidase"}
{"gene.name":"btuC","gene.annotation":"vitamin Bl2 transport; cytoplasmic membrane","operon.name":"btuCED","operon.comments":"vitamin Bl2 transport"}
{"gene.name":"btuE","gene.annotation":"periplasmic protein","operon.name":"btuCED","operon.comments":"vitamin Bl2 transport"}
{"gene.name":"btuD","gene.annotation":"vitamin Bl2 transport, membrane-associated protein","operon.name":"btuCED","operon.comments":"vitamin Bl2 transport"}
{"gene.name":"pheS","gene.annotation":"phenylalanine tRNA synthetase (EC 6.1.1.20), alpha subunit","operon.name":"pheST","operon.comments":"phenylalanine tRNA synthetase"}
{"gene.name":"pheT","gene.annotation":"phenylalanine tRNA synthetase (EC 6.1.1.20), beta subunit","operon.name":"pheST","operon.comments":"phenylalanine tRNA synthetase"}
{"gene.name":"celA","gene.annotation":"unknown product","operon.name":"celABCDF","operon.comments":"cellobiose uptake"}
{"gene.name":"celB","gene.annotation":"PEP dependent phosphotransferase enzyme II cellobiose","operon.name":"celABCDF","operon.comments":"cellobiose uptake"}
{"gene.name":"celC","gene.annotation":"enzyme III - cellobiose","operon.name":"celABCDF","operon.comments":"cellobiose uptake"}
{"gene.name":"celD","gene.annotation":"repressor of the cel opern","operon.name":"celABCDF","operon.comments":"cellobiose uptake"}
{"gene.name":"celF","gene.annotation":"phospho-beta-blucosidase","operon.name":"celABCDF","operon.comments":"cellobiose uptake"}
{"gene.name":"Regulation","gene.annotation":"promoter","operon.name":"manXYZ","operon.comments":"mannose uptake"}
{"gene.name":"manX","gene.annotation":"mannose permease subunit III-Man","operon.name":"manXYZ","operon.comments":"mannose uptake"}
{"gene.name":"manY","gene.annotation":"mannose permease subunit II-P-Man","operon.name":"manXYZ","operon.comments":"mannose uptake"}
{"gene.name":"manZ","gene.annotation":"mannose permease subunit II-M-Man","operon.name":"manXYZ","operon.comments":"mannose uptake"}
{"gene.name":"edd","gene.annotation":"6-phosphogluconate dehydratase","operon.name":"edd-eda","operon.comments":"Entner-Doudoroff pathway"}
{"gene.name":"eda","gene.annotation":"KDPG aldolase","operon.name":"edd-eda","operon.comments":"Entner-Doudoroff pathway"}
{"gene.name":"ruvA","gene.annotation":"holliday junction DNA helicase RuvA","operon.name":"ruvAB","operon.comments":"DNA repair and recombination"}
{"gene.name":"ruvB","gene.annotation":"holliday junction DNA helicase RuvB","operon.name":"ruvAB","operon.comments":"DNA repair and recombination"}
{"gene.name":"1848","gene.annotation":"(flhB) flagellar biosynthesis protein","operon.name":"flhBA","operon.comments":"flagellar biosynthesis"}
{"gene.name":"flhA","gene.annotation":"flagellar biosynthesis protein","operon.name":"flhBA","operon.comments":"flagellar biosynthesis"}
{"gene.name":"tar","gene.annotation":"(cheM) ethyl-accepting chemotaxis protein 11, chemoreceptor for aspartate","operon.name":"cheRBYZ","operon.comments":"motilily and chemotaxis"}
{"gene.name":"tap","gene.annotation":"methyl-accepting chemotaxis protein IV, peptide receptor","operon.name":"cheRBYZ","operon.comments":"motilily and chemotaxis"}
{"gene.name":"cheR","gene.annotation":"response regulator for chemotaxis; protein glutamate methyltransferase activity (EC 2.1.1.80) methylates receptors","operon.name":"cheRBYZ","operon.comments":"motilily and chemotaxis"}
{"gene.name":"cheB","gene.annotation":"response regulator for chemotaxis (cheA sensor); protein methyl-esterase (EC 3.1.1.61) demethylates receptors","operon.name":"cheRBYZ","operon.comments":"motilily and chemotaxis"}
{"gene.name":"cheY","gene.annotation":"response regulator for chemotactic response (cheA sensor); switch regulator placing it in counterclockwisc state","operon.name":"cheRBYZ","operon.comments":"motilily and chemotaxis"}
{"gene.name":"cheZ","gene.annotation":"chemotactic response; CheY protein phosphatase; antagonist of CheY as switch regulator","operon.name":"cheRBYZ","operon.comments":"motilily and chemotaxis"}
{"gene.name":"motA","gene.annotation":"proton conductor component of motor; no effect on switching","operon.name":"motABcheAW","operon.comments":"chemotaxis"}
{"gene.name":"motB","gene.annotation":"enables flagellar motor rotation, linking torque machillery to cell wall; no effect on switching","operon.name":"motABcheAW","operon.comments":"chemotaxis"}
{"gene.name":"cheA","gene.annotation":"sensor for cheY and cheB chemotactic response; histidine protein kinase (EC 2.7.1.-)","operon.name":"motABcheAW","operon.comments":"chemotaxis"}
{"gene.name":"cheW","gene.annotation":"positive regulator of CheA protein activity","operon.name":"motABcheAW","operon.comments":"chemotaxis"}
{"gene.name":"flhD","gene.annotation":"(flbB) flagellar transcriptional activator","operon.name":"flhDC","operon.comments":"flagellar transcriptional activators"}
{"gene.name":"flhC","gene.annotation":"(flaI) flagellar transcriptional activator","operon.name":"flhDC","operon.comments":"flagellar transcriptional activators"}
{"gene.name":"otsB","gene.annotation":"trehalose-6-phosphate phosphatase","operon.name":"otsBA","operon.comments":"trehalose synthesis"}
{"gene.name":"otsA","gene.annotation":"trehalose-6-phosphate synthase","operon.name":"otsBA","operon.comments":"trehalose synthesis"}
{"gene.name":"araF ","gene.annotation":"L-arabinose binding preprotein","operon.name":"araFGH","operon.comments":"periplasmic binding protein inner membrane protein controled by araC"}
{"gene.name":"Regulation","gene.annotation":"terminator","operon.name":"araFGH","operon.comments":"periplasmic binding protein inner membrane protein controled by araC"}
{"gene.name":"araG","gene.annotation":"high-affinity L-arabinose transport system","operon.name":"araFGH","operon.comments":"periplasmic binding protein inner membrane protein controled by araC"}
{"gene.name":"1867","gene.annotation":"","operon.name":"araFGH","operon.comments":"periplasmic binding protein inner membrane protein controled by araC"}
{"gene.name":"araH","gene.annotation":"high-affinity L-arabinose transport system; membrane protein","operon.name":"araFGH","operon.comments":"periplasmic binding protein inner membrane protein controled by araC"}
{"gene.name":"Regulation","gene.annotation":"terminator","operon.name":"araFGH","operon.comments":"periplasmic binding protein inner membrane protein controled by araC"}
{"gene.name":"uvrY","gene.annotation":"23.9 kD protein","operon.name":"uvrYC","operon.comments":"DNA repair"}
{"gene.name":"uvrC","gene.annotation":"excinuclease ABC subunit C","operon.name":"uvrYC","operon.comments":"DNA repair"}
{"gene.name":"fliA","gene.annotation":"(flaD) RNA polymerase sigma factor for flagellar operon","operon.name":"fliAZY","operon.comments":"flagellar biosynthesis"}
{"gene.name":"fliZ","gene.annotation":"FliZ protein","operon.name":"fliAZY","operon.comments":"flagellar biosynthesis"}
{"gene.name":"fliY","gene.annotation":"member of the extracellular solute-binding protein family 3","operon.name":"fliAZY","operon.comments":"flagellar biosynthesis"}
{"gene.name":"fliD","gene.annotation":"","operon.name":"fliDST","operon.comments":"flagellar biosynthesis"}
{"gene.name":"fliS","gene.annotation":"","operon.name":"fliDST","operon.comments":"flagellar biosynthesis"}
{"gene.name":"fliT","gene.annotation":"","operon.name":"fliDST","operon.comments":"flagellar biosynthesis"}
{"gene.name":"fliF","gene.annotation":"(flaBI) flagellar m-ring protein","operon.name":"fliFGHIJK","operon.comments":"flagellar biosynthesis"}
{"gene.name":"fliG","gene.annotation":"(flaBII) flagellar motor switch protein FliG","operon.name":"fliFGHIJK","operon.comments":"flagellar biosynthesis"}
{"gene.name":"fliH","gene.annotation":"(flaBIII) flagellar assembly protein FliH","operon.name":"fliFGHIJK","operon.comments":"flagellar biosynthesis"}
{"gene.name":"fliI","gene.annotation":"(flaC) flagellar biosynthesis; export of flagellar proteins?","operon.name":"fliFGHIJK","operon.comments":"flagellar biosynthesis"}
{"gene.name":"fliJ","gene.annotation":"(flaO) flagellar biosynthesis","operon.name":"fliFGHIJK","operon.comments":"flagellar biosynthesis"}
{"gene.name":"fliK","gene.annotation":"(flaE) flagellar biosynthesis, hook length control","operon.name":"fliFGHIJK","operon.comments":"flagellar biosynthesis"}
{"gene.name":"fliL","gene.annotation":"(flaAI) FliL protein","operon.name":"fliLMNOPQR","operon.comments":"flagellar biosynthesis"}
{"gene.name":"fliM","gene.annotation":"(flaAII) flagellar motor switch protein FliM","operon.name":"fliLMNOPQR","operon.comments":"flagellar biosynthesis"}
{"gene.name":"fliN","gene.annotation":"(motD) flagellar motor switch protein FliN","operon.name":"fliLMNOPQR","operon.comments":"flagellar biosynthesis"}
{"gene.name":"fliO","gene.annotation":"(flbD) flagellar protein FliO","operon.name":"fliLMNOPQR","operon.comments":"flagellar biosynthesis"}
{"gene.name":"fliP","gene.annotation":"(flaR) flagellar biosynthesis","operon.name":"fliLMNOPQR","operon.comments":"flagellar biosynthesis"}
{"gene.name":"fliQ","gene.annotation":"(flaQ) flagellar biosynthesis","operon.name":"fliLMNOPQR","operon.comments":"flagellar biosynthesis"}
{"gene.name":"fliR","gene.annotation":"(flaP) flagellar biosynthesis","operon.name":"fliLMNOPQR","operon.comments":"flagellar biosynthesis"}
{"gene.name":"dcm","gene.annotation":"DNA-cytosine methyltransferase","operon.name":"dcm-vsr","operon.comments":"DNA processing"}
{"gene.name":"vsr","gene.annotation":"very short patch repair by repairing the mismatches in favor of the G-containing strand","operon.name":"dcm-vsr","operon.comments":"DNA processing"}
{"gene.name":"cobU","gene.annotation":"cobinamide kinase and guanylyltransferase","operon.name":"cobUST","operon.comments":"cobalamin (coenzyme B12) biosynthesis"}
{"gene.name":"cobS","gene.annotation":"cobalamin (5-phosphate) synthase\tcobUST\tcobalamin (coenzyme B12) biosynthesis\ncobT\tnicotinate-nucleotide-dimethylbenzimidazole phosphoribosyl transferase\tcobUST\tcobalamin (coenzyme B12) biosynthesis\nhisG\tATP phosphoribosyltransferase (EC 2.4.2.17)\thisGDCBHAFE\thistidine biosynthesis\nhisD\tL-histidinol:NAD+ oxidoreductase (EC 1.1.1.23)\thisGDCBHAFE\thistidine biosynthesis\nhisC\thistidinol-phosphate aminotransferase (EC 2.6.1.9)\thisGDCBHAFE\thistidine biosynthesis\nhisB\timidazoleglycerolphosphate dehydratase (EC 4.2.1.19) and histidinol phosphate phosphatase (EC 3.1.3.15)\thisGDCBHAFE\thistidine biosynthesis\nhisH\tamidotransferase (EC 2.4.2.-)\thisGDCBHAFE\thistidine biosynthesis\nhisA\tN-(5-phospho-L-ribosyl-formimino)-5-amino-l-(5-phosphoribosyl)-4-imidazolecarboxamide isomerase (EC 5.3.1.16)\thisGDCBHAFE\thistidine biosynthesis\nhisF\tcyclase\thisGDCBHAFE\thistidine biosynthesis\nhisI\t(hisIE) phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) and phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)\thisGDCBHAFE\thistidine biosynthesis\nrfbB\tTDP-glucose oxidoreductase\trfb\tO-specific lipopolysaccharide biosynthesis\nrfbD\tTDP-rhamnose synthetase\trfb\tO-specific lipopolysaccharide biosynthesis\nrfbA\tTDP-glucose pyrophosphorylase\trfb\tO-specific lipopolysaccharide biosynthesis\nrfbC\t\trfb\tO-specific lipopolysaccharide biosynthesis\nrfbX\tputative O-antigen transporter\trfb\tO-specific lipopolysaccharide biosynthesis\nyefE\thypothetical 43.0 kD protein; putative Galf synthesis pathway protein\trfb\tO-specific lipopolysaccharide biosynthesis\nrfc\tputative O-antigen polymerase\trfb\tO-specific lipopolysaccharide biosynthesis\nyefG\thypothetical 37.8 kD protein; putative Galf transferase\trfb\tO-specific lipopolysaccharide biosynthesis\nyefH\tputative O-acetyl transferase\trfb\tO-specific lipopolysaccharide biosynthesis\nyefI\tputative glucose transferase\trfb\tO-specific lipopolysaccharide biosynthesis\ndcd\tdeoxycytidine triphosphate deaminase\tdcd\tdeoxycytidine triphosphate deaminase\nyegA\tORF; may be in an operon with dcd gene\tdcd\tdeoxycytidine triphosphate deaminase\nbaeS\tkinase\tbaeSR\ttwo-component system\nbaeR\tregulator\tbaeSR\ttwo-component system\ngatY\tunknown\tgat\tgalactitol uptake\ngatZ\tunknown\tgat\tgalactitol uptake\ngatA\tEIIA domain;PTS-dependent Gat transport and phosphorylation\tgat\tgalactitol uptake\ngatB\tEIIB\tgat\tgalactitol uptake\ngatC\tEIIC\tgat\tgalactitol uptake\ngatD\tgalactitol-1-phosphate dehydrogenase\tgat\tgalactitol uptake\nmglB\tgalactose-binding protein; receptor for galactose taxis\tmglBA\tgalactose transport\nmglA\tmethyl-galactoside transport and galactose taxis, cytoplasmic membrane protein\tmglBA\tgalactose transport\nmglC\tmethyl-galactoside transport and galactose taxis\tmglBA\tgalactose transport\nfruB\tfructose-specific IIBC component\tfru\tfructose uptake\nfruK\t1-phosphofructokinase\tfru\tfructose uptake\nfruA\tfructose-specific IIA/FPR component\tfru\tfructose uptake\nccmA\tABC-type ATP-dependent transporter heme exporter protein A\tccmABCDEFGH\tbiogenesis of c-type cytochrome\nccmB\theme exporter protein B\tccmABCDEFGH\tbiogenesis of c-type cytochrome\nccmC\theme exporter protein C\tccmABCDEFGH\tbiogenesis of c-type cytochrome\nccmD\theme exporter protein D\tccmABCDEFGH\tbiogenesis of c-type cytochrome\nccmE\trequired for the biogenesis of c-type cytochromes\tccmABCDEFGH\tbiogenesis of c-type cytochrome\nccmF\trequired for the biogenesis of c-type cytochromes\tccmABCDEFGH\tbiogenesis of c-type cytochrome\ndsbE\t(ccmG) probable thioredoxin\tccmABCDEFGH\tbiogenesis of c-type cytochrome\nccmH\trequired for the biogenesis of c-type cytochromes\tccmABCDEFGH\tbiogenesis of c-type cytochrome\nnapA\tprobable nitrate reductase\tnapAGHBC\telectron transfer\nnapG\tferredoxin-type protein\tnapAGHBC\telectron transfer\nnapH\tferredoxin-type protein\tnapAGHBC\telectron transfer\nnapB\tcytochrome c-type protein\tnapAGHBC\telectron transfer\nnapC\tcytochrome c-type protein\tnapAGHBC\telectron transfer\nada\tO6-methylguanine-DNA methyltransferase; regulatory protein which activates the transcription of alkA, alkB and aidB\tada-alkB\tDNA repair\nalkB\tAlkB protein; repairing DNA alkylation damage\tada-alkB\tDNA repair\natoS\tkinase\tatoSC\ttwo-component system\natoC\tregulator; ornithine decarboxylase antizyme\tatoSC\ttwo-component system\natoD\tacetyl-CoA:acetoacetyl-CoA transferase (EC 2.8.3.8) subunit A\tatoDAB\tshort-chain fatty acids metabolism\natoA\tacetyl-CoA:acetoacetyl-CoA transferase (EC 2.8.3.8) subunit B\tatoDAB\tshort-chain fatty acids metabolism\natoB\tacetyl-CoA acetyltransferase (EC 2.3.1.9)\tatoDAB\tshort-chain fatty acids metabolism\nnrdA\tribonucleoside diphosphate reductase B1 subunit\tnrdAB\tribonucleoside diphosphate reductase\nnrdB\tribonucleoside diphosphate reductase B2 subunit\tnrdAB\tribonucleoside diphosphate reductase\nglpT\tsn-glycerol-3-phosphate permease\tglpTQ\tsn-glycerol-3-phosphate uptake\nglpQ\tglycerophosphodiester diesterase (EC 3.1.4.46)\tglpTQ\tsn-glycerol-3-phosphate uptake\nglpA\tglycerol-3-phosphate dehydrogenase subunit A\tglpABC\tglycerol-3-phosphate dehydrogenase\nglpB\tglycerol-3-phosphate dehydrogenase subunit B\tglpABC\tglycerol-3-phosphate dehydrogenase\nglpC\tglycerol-3-phosphate dehydrogenase subunit C\tglpABC\tglycerol-3-phosphate dehydrogenase\nmenF\t\tmenFDBCE\tmenaquinone (vitamin K2) biosynthesis\nmenD\t\tmenFDBCE\tmenaquinone (vitamin K2) biosynthesis\nyfbB\t\tmenFDBCE\tmenaquinone (vitamin K2) biosynthesis\nmenB\t\tmenFDBCE\tmenaquinone (vitamin K2) biosynthesis\nmenC\tOSB synthase; o-succinylbenzoate synthase\tmenFDBCE\tmenaquinone (vitamin K2) biosynthesis\nmenE\tOSB-CoA synthase; o-succinylbenzoate-CoA synthase\tmenFDBCE\tmenaquinone (vitamin K2) biosynthesis\nnuoA\tNADH dehydrogenase I, subunit NuoA\tnuo\tNADH dehydrogenase\nnuoB\tNADH dehydrogenase I, subunit NuoB\tnuo\tNADH dehydrogenase\n2244\t(nuoD) NADH dehydrogenase I, subunit NuoD\tnuo\tNADH dehydrogenase\nnuoE\tNADH dehydrogenase I, subunit NuoE\tnuo\tNADH dehydrogenase\nnuoF\tNADH dehydrogenase I, subunit NuoF\tnuo\tNADH dehydrogenase\nnuoG\tNADH dehydrogenase I, subunit NuoG\tnuo\tNADH dehydrogenase\nnuoH\tNADH dehydrogenase I, subunit NuoH\tnuo\tNADH dehydrogenase\nnuoI\tNADH dehydrogenase I, subunit NuoI\tnuo\tNADH dehydrogenase\nnuoJ\tNADH dehydrogenase I, subunit NuoJ\tnuo\tNADH dehydrogenase\nnuoK\tNADH dehydrogenase I, subunit NuoK\tnuo\tNADH dehydrogenase\nnuoL\tNADH dehydrogenase I, subunit NuoL\tnuo\tNADH dehydrogenase\nnuoM\tNADH dehydrogenase I, subunit NuoM\tnuo\tNADH dehydrogenase\nnuoN\tNADH dehydrogenase I, subunit NuoN\tnuo\tNADH dehydrogenase\nackA\tacetate kinase\tackA-pta\tthe activation of acetate to acetyl CoA\npta\tphosphoacetyltransferase\tackA-pta\tthe activation of acetate to acetyl CoA\nhisM\thistidine transport system permease protein HisM\thisMP\thistidine transport\nhisP \thistidine transport ATP-binding protein HisP\thisMP\thistidine transport\ncvpA\tdedE;colicin V production protein\tpurF\tde novo purine nucleotide biosynthes\npurF\tamidophosphoribosyltransferase (EC 2.4.2.14)\tpurF\tde novo purine nucleotide biosynthes\nubiX\tdedF;3-octaprenyl-4-hydroxybenzoate carboxy-lyase\tpurF\tde novo purine nucleotide biosynthes\nRegulation\tterminator\tpurF\tde novo purine nucleotide biosynthes\nfolC\t(dedC) folylpolyglutamate synthase (EC 6.3.2.17)\tdedCD\tfolylpolyglutamate synthase\ndedD\tDedD protein\tdedCD\tfolylpolyglutamate synthase\nRegulation\tterminator\tdedCD\tfolylpolyglutamate synthase\npdxB\tpseudouridine synthase I\thisT\tpseudouridine synthase\nusg\t(usg1) Usg protein\thisT\tpseudouridine synthase\ntruA\t(hisT) pseudouridine synthase 1\thisT\tpseudouridine synthase\ndedA\tDsg protein\thisT\tpseudouridine synthase\naccD\t(dedB) acetyl-CoA carboxylase beta subunit\thisT\tpseudouridine synthase\nRegulation\tterminator\thisT\tpseudouridine synthase\ndsdX\tprobable permease for an unknown substrate\tdsdXA\tD-serine uptake\ndsdA\tD-serine deaminase\tdsdXA\tD-serine uptake\nxapA\txanthosine phosphorylase\txapAB\txanthosine uptake\nxapB\txanthosine permease\txapAB\txanthosine uptake\nptsH\tsugar phosphotransferase HPr\tpts\tsugar uptake\nptsI\tenzyme I\tpts\tsugar uptake\ncrr\tenzyme III for glucose\tpts\tsugar uptake\nRegulation\tterminator\tpts\tsugar uptake\ncysP\tthiosulfate binding protein\tcysPTWAM\tthiosulfate transport\ncysU\t(cysT) sulfate permease T protein\tcysPTWAM\tthiosulfate transport\ncysW\tsulfate permease W protein\tcysPTWAM\tthiosulfate transport\ncysA\tsulfate permease A protein; chromate resistance\tcysPTWAM\tthiosulfate transport\ncysM\tO-acetylserine sulfhydrolase B (EC 4.2.99.8)\tcysPTWAM\tthiosulfate transport\namiA\tprobable n-acetylmuramoyl-l-alanine amidase\tamiAhemF\tcoproporphyrinogen oxidase\nhemF\tcoproporphyrinogen oxidase\tamiAhemF\tcoproporphyrinogen oxidase\ndapA\tdihydrodipicolinate synthase (EC 4.2.1.52)\tdapAnlp\tlysine biosynthesis\nnlpB\tlipoprotein-34\tdapAnlp\tlysine biosynthesis\nupp\turacil phosphoribosyltransferase\tupp-uraA\tutilization of uracil\nuraA\turacil permease\tupp-uraA\tutilization of uracil\npurM\tphosphoribosylformylglycinamidine cyclo-ligase\tpurMN\tde novo purine biosynthesis\npurN\tphosphoribosylglycinamidine formyltransferase\tpurMN\tde novo purine biosynthesis\nppk\tpolyphosphate kinase\tppx\tdegradation of inorganic polyphosphates\nppx\texopolyphosphatase\tppx\tdegradation of inorganic polyphosphates\nguaB\tIMP dehydrogenase\tguaBA\tpurine catabolite\nguaA\tGMP synthetase\tguaBA\tpurine catabolite\nRegulation\tPDX box\tpdxJ\tpyridoxal 5-phosphate biosynthesis","operon.name":"","operon.comments":""}
{"gene.name":"pdxJ","gene.annotation":"pyridoxal phosphate biosynthesis","operon.name":"pdxJ","operon.comments":"pyridoxal 5-phosphate biosynthesis\nacpS\tholo-[acyl-carrier protein] synthase (EC 2.7.8.7)\tpdxJ\tpyridoxal 5-phosphate biosynthesis"}
{"gene.name":"rnc","gene.annotation":"RNase III","operon.name":"rnc","operon.comments":"DNA/RNA processing"}
{"gene.name":"era","gene.annotation":"GTP-binding protein era","operon.name":"rnc","operon.comments":"DNA/RNA processing"}
{"gene.name":"recO","gene.annotation":"conjugational recombination and DNA repair","operon.name":"rnc","operon.comments":"DNA/RNA processing"}
{"gene.name":"lepA","gene.annotation":"GTP binding protein","operon.name":"lepAB","operon.comments":"secretory machinery"}
{"gene.name":"lepB","gene.annotation":"signal peptidase I","operon.name":"lepAB","operon.comments":"secretory machinery"}
{"gene.name":"aroF","gene.annotation":"DHAP synthetase","operon.name":"tyr","operon.comments":"biosynthesis of aromatic amino acids"}
{"gene.name":"tyrA","gene.annotation":"chorismate mutase/prephenate dehydratase","operon.name":"tyr","operon.comments":"biosynthesis of aromatic amino acids"}
{"gene.name":"Regulation","gene.annotation":"terminator","operon.name":"tyr","operon.comments":"biosynthesis of aromatic amino acids"}
{"gene.name":"rpsP","gene.annotation":"ribosomal protein S16","operon.name":"trmD","operon.comments":"ribosomal protein"}
{"gene.name":"yfjA","gene.annotation":"","operon.name":"trmD","operon.comments":"ribosomal protein"}
{"gene.name":"trmD","gene.annotation":"tRNA (m1G) methyltransferae","operon.name":"trmD","operon.comments":"ribosomal protein"}
{"gene.name":"rplS","gene.annotation":"ribosomal protein L19","operon.name":"trmD","operon.comments":"ribosomal protein"}
{"gene.name":"nrdE","gene.annotation":"ribonucleoside-diphosphate reductase 2 alpha chain","operon.name":"nrdEF","operon.comments":"one of two class I ribonucleotide reductases"}
{"gene.name":"nrdF","gene.annotation":"ribonucleoside-diphosphate reductase 2 beta chain","operon.name":"nrdEF","operon.comments":"one of two class I ribonucleotide reductases"}
{"gene.name":"proV","gene.annotation":"high-affinity transport system for glycine betaine and proline;glycine betaine-binding protein","operon.name":"proVWX","operon.comments":"proline transport"}
{"gene.name":"proW","gene.annotation":"high-affinity transport system for glycine betaine and proline","operon.name":"proVWX","operon.comments":"proline transport"}
{"gene.name":"proX","gene.annotation":"periplasmic glycine betaine-binding protein","operon.name":"proVWX","operon.comments":"proline transport"}
{"gene.name":"srlA_1","gene.annotation":"(gutA) D-glucose (sorbitol)-specific enzyme II of phosphotransferase system","operon.name":"srlABD","operon.comments":"glucitol uptake PTS"}
{"gene.name":"srlA_2","gene.annotation":"","operon.name":"srlABD","operon.comments":"glucitol uptake PTS"}
{"gene.name":"srlB","gene.annotation":"(gutB) D-glucose (sorbitol)-specific enzyme III of phosphotransferase system","operon.name":"srlABD","operon.comments":"glucitol uptake PTS"}
{"gene.name":"srlD","gene.annotation":"(gutD) glucitol (sorbitol)-6-phosphate dehydrogenase (EC 1.1.1.140)","operon.name":"srlABD","operon.comments":"glucitol uptake PTS"}
{"gene.name":"gutM","gene.annotation":"activator","operon.name":"srlABD","operon.comments":"glucitol uptake PTS"}
{"gene.name":"srlR","gene.annotation":"(gutR) repressor","operon.name":"srlABD","operon.comments":"glucitol uptake PTS"}
{"gene.name":"gutQ","gene.annotation":"","operon.name":"srlABD","operon.comments":"glucitol uptake PTS"}
{"gene.name":"ascF","gene.annotation":"phosphotransferase enzyme II (asc) cryptic, transports specific beta-glucosides (EC 2.7.1.69)","operon.name":"ascFB","operon.comments":"cryptic sugar transport"}
{"gene.name":"ascB","gene.annotation":"6-phospho-beta-glucosidase (EC 3.2.1.86); cryptic","operon.name":"ascFB","operon.comments":"cryptic sugar transport"}
{"gene.name":"hycA","gene.annotation":"transcriptional repression of hyc and hyp operons","operon.name":"hyc","operon.comments":"hydrogenase-3"}
{"gene.name":"hycB","gene.annotation":"probable small subunit of hydrogenase-3, iron-sulfur protein (part of formate hydrogen-lyase [FHL] complex) (EC 1.18.99.1)","operon.name":"hyc","operon.comments":"hydrogenase-3"}
{"gene.name":"hycC","gene.annotation":"membrane-spanning protein of hydrogenase 3 (part of FHL complex) (EC 1.18.99.1)","operon.name":"hyc","operon.comments":"hydrogenase-3"}
{"gene.name":"hycD","gene.annotation":"membrane-spanning protein of hydrogenase 3 (part of FHL complex) (EC 1.18.99.1)","operon.name":"hyc","operon.comments":"hydrogenase-3"}
{"gene.name":"hycE","gene.annotation":"probable iron-sulfur protein of hydrogenase 3 (part of FHL complex) (EC 1.18.99.1)","operon.name":"hyc","operon.comments":"hydrogenase-3"}
{"gene.name":"hycF","gene.annotation":"probable iron-sulfur protein of hydrogenase 3 (part of FHL complex) (EC 1.18.99.1)","operon.name":"hyc","operon.comments":"hydrogenase-3"}
{"gene.name":"hycG","gene.annotation":"hydrogenase activity","operon.name":"hyc","operon.comments":"hydrogenase-3"}
{"gene.name":"hycH","gene.annotation":"processing of large subunit (HycE) of hydrogenase 3 (part of the FHL complex)","operon.name":"hyc","operon.comments":"hydrogenase-3"}
{"gene.name":"hypA","gene.annotation":"pleiotrophic effects on three hydrogenase isozymes","operon.name":"hypABCDE","operon.comments":"hydrogenase"}
{"gene.name":"hypB","gene.annotation":"pleiotrophic effects on three hydrogenase isozymes","operon.name":"hypABCDE","operon.comments":"hydrogenase"}
{"gene.name":"hypC","gene.annotation":"pleiotrophic effects on three hydrogenase isozymes","operon.name":"hypABCDE","operon.comments":"hydrogenase"}
{"gene.name":"hypD","gene.annotation":"pleiotrophic effects on three hydrogenase isozymes","operon.name":"hypABCDE","operon.comments":"hydrogenase"}
{"gene.name":"hypE","gene.annotation":"","operon.name":"hypABCDE","operon.comments":"hydrogenase"}
{"gene.name":"cysD","gene.annotation":"ATP:sulfate adenyltransferase (EC 2.7.7.4), subunit","operon.name":"cysDNC","operon.comments":"cysteine biosynthetic pathway"}
{"gene.name":"cysN","gene.annotation":"ATP-sulfurylase (ATP:sulfate adenylyltransferase) (EC 2.7.7.4),subunit","operon.name":"cysDNC","operon.comments":"cysteine biosynthetic pathway"}
{"gene.name":"cysC","gene.annotation":"adenosine 5-phosphosulfate kinase (EC 2.7.1.25)\tcysDNC\tcysteine biosynthetic pathway\ncysJ\tsulfite reductase (NADPH) flavoprotein beta subunit\tcysJIH\tcysteine biosynthesis\ncysI\tsulfite reductase (NADPH) hemoprotein alpha subunit\tcysJIH\tcysteine biosynthesis\ncysH\t3-phosphoadenosine 5-phosphosulfate sulfotransferase\tcysJIH\tcysteine biosynthesis\nrelA\tATP:GTP 3-pyrophosphotransferase","operon.name":"relA","operon.comments":"the stringent response to amino acid starvation"}
{"gene.name":"chpR","gene.annotation":"(mazE) homologous to plasmid R100 pemI gene","operon.name":"relA","operon.comments":"the stringent response to amino acid starvation"}
{"gene.name":"chpA","gene.annotation":"(mazF) homologous to plasmid R100 pemK gene","operon.name":"relA","operon.comments":"the stringent response to amino acid starvation"}
{"gene.name":"mazG","gene.annotation":"homologous to a /Streptomyces cacaoi/ beta-lactamase","operon.name":"relA","operon.comments":"the stringent response to amino acid starvation"}
{"gene.name":"sdaC","gene.annotation":"putative serine transporter","operon.name":"sdaCB","operon.comments":"serine uptake"}
{"gene.name":"sdaB","gene.annotation":"L-serine deaminase","operon.name":"sdaCB","operon.comments":"serine uptake"}
{"gene.name":"fucA","gene.annotation":"L-fuculose-1-phosphate aldolase (EC 4.1.2.17)","operon.name":"fucAO","operon.comments":"fucose metabolism"}
{"gene.name":"fucO","gene.annotation":"L-1,2-propanediol oxidoreductase (EC 1.1.1.77)","operon.name":"fucAO","operon.comments":"fucose metabolism"}
{"gene.name":"fucP","gene.annotation":"fucose permease; maybe symport","operon.name":"fucPIK","operon.comments":"fucose uptake metabolism"}
{"gene.name":"fucI","gene.annotation":"L-fucose isomerase (EC 5.3.1.-)","operon.name":"fucPIK","operon.comments":"fucose uptake metabolism"}
{"gene.name":"fucK","gene.annotation":"L-fuculokinase (EC 2.7.1.51)","operon.name":"fucPIK","operon.comments":"fucose uptake metabolism"}
{"gene.name":"fucU","gene.annotation":"","operon.name":"fucPIK","operon.comments":"fucose uptake metabolism"}
{"gene.name":"fucR","gene.annotation":"positive regulator of the fuc operon","operon.name":"fucPIK","operon.comments":"fucose uptake metabolism"}
{"gene.name":"ptr","gene.annotation":"protease III precursor","operon.name":"ptr-recBD","operon.comments":"endopeptidase and exonuclease"}
{"gene.name":"recB","gene.annotation":"exonuclease V subunit","operon.name":"ptr-recBD","operon.comments":"endopeptidase and exonuclease"}
{"gene.name":"recD","gene.annotation":"exonuclease V alpha-subunit","operon.name":"ptr-recBD","operon.comments":"endopeptidase and exonuclease"}
{"gene.name":"prfB","gene.annotation":"peptide chain release factor 2","operon.name":"prfBlysS","operon.comments":"peptide chain release factor"}
{"gene.name":"lysS","gene.annotation":"(herC) lysyl-tRNA synthetase (EC 6.1.1.6)","operon.name":"prfBlysS","operon.comments":"peptide chain release factor"}
{"gene.name":"gcvT","gene.annotation":"aminomethyltransferase","operon.name":"gcv","operon.comments":"glycine cleavage system"}
{"gene.name":"gcvH","gene.annotation":"shuttles the methylamine group of glycine from the P protein to the T protein","operon.name":"gcv","operon.comments":"glycine cleavage system"}
{"gene.name":"gcvP","gene.annotation":"glycine dehydrogenase","operon.name":"gcv","operon.comments":"glycine cleavage system"}
{"gene.name":"Regulation","gene.annotation":"terminator","operon.name":"gcv","operon.comments":"glycine cleavage system"}
{"gene.name":"Comment","gene.annotation":"leucine-responsive genes","operon.name":"serA","operon.comments":"L-serine biosynthesis"}
{"gene.name":"rpiA","gene.annotation":"ribose-5-phosphate isomerase","operon.name":"serA","operon.comments":"L-serine biosynthesis"}
{"gene.name":"serA","gene.annotation":"D-3-phosphoglycerate dehydrogenase","operon.name":"serA","operon.comments":"L-serine biosynthesis"}
{"gene.name":"glcD","gene.annotation":"glycolate oxidase","operon.name":"glc","operon.comments":"glycolate utilization"}
{"gene.name":"2912","gene.annotation":"(glcE) glycolate oxidase subunit","operon.name":"glc","operon.comments":"glycolate utilization"}
{"gene.name":"glcG","gene.annotation":"","operon.name":"glc","operon.comments":"glycolate utilization"}
{"gene.name":"glcB","gene.annotation":"","operon.name":"glc","operon.comments":"glycolate utilization"}
{"gene.name":"hybA","gene.annotation":"putative hydrogenase-2 small subunit","operon.name":"hyb","operon.comments":"hydrogenase-2"}
{"gene.name":"hybB","gene.annotation":"probable Ni/Fe-hydrogenase 2 b-type cytochrome subunit","operon.name":"hyb","operon.comments":"hydrogenase-2"}
{"gene.name":"hybC","gene.annotation":"hydrogenase-2 large subunit","operon.name":"hyb","operon.comments":"hydrogenase-2"}
{"gene.name":"hybD","gene.annotation":"HybD protein","operon.name":"hyb","operon.comments":"hydrogenase-2"}
{"gene.name":"hybE","gene.annotation":"HybE protein","operon.name":"hyb","operon.comments":"hydrogenase-2"}
{"gene.name":"hybF","gene.annotation":"HybF protein","operon.name":"hyb","operon.comments":"hydrogenase-2"}
{"gene.name":"hybG","gene.annotation":"HybG protein","operon.name":"hyb","operon.comments":"hydrogenase-2"}
{"gene.name":"ttdA","gene.annotation":"tartrate dehydratse","operon.name":"ttdAB","operon.comments":"an oxygen-labile stereospecific L-tartrate dehydratase"}
{"gene.name":"ttdB","gene.annotation":"tartrate dehydratse","operon.name":"ttdAB","operon.comments":"an oxygen-labile stereospecific L-tartrate dehydratase"}
{"gene.name":"Regulation","gene.annotation":"promoter","operon.name":"rpsU-dnaG-rpoD","operon.comments":"ribosomal protein"}
{"gene.name":"Regulation","gene.annotation":"LexA binding site","operon.name":"rpsU-dnaG-rpoD","operon.comments":"ribosomal protein"}
{"gene.name":"rpsU","gene.annotation":"ribosomal protein S21","operon.name":"rpsU-dnaG-rpoD","operon.comments":"ribosomal protein"}
{"gene.name":"dnaG","gene.annotation":"DNA primase","operon.name":"rpsU-dnaG-rpoD","operon.comments":"ribosomal protein"}
{"gene.name":"rpoD","gene.annotation":"RNA polymerase sigma-subunit","operon.name":"rpsU-dnaG-rpoD","operon.comments":"ribosomal protein"}
{"gene.name":"Regulation","gene.annotation":"terminator","operon.name":"rpsU-dnaG-rpoD","operon.comments":"ribosomal protein"}
{"gene.name":"ebgA","gene.annotation":"beta-D-galactosidase, alpha subunit; cryptic gene (EC 3.2.1.23); very poor lactase","operon.name":"ebgAC","operon.comments":"beta galactoside utilization"}
{"gene.name":"ebgC","gene.annotation":"beta-D-galactosidase, beta subunit; cryptic gene (EC 3.2.1.23)","operon.name":"ebgAC","operon.comments":"beta galactoside utilization"}
{"gene.name":"ygjI","gene.annotation":"(ebgB) possible homolog of lacY","operon.name":"ebgAC","operon.comments":"beta galactoside utilization"}
{"gene.name":"uxaC","gene.annotation":"uronate isomerase (EC 5.3.1.12)","operon.name":"uxaCA","operon.comments":"pentose and glucuronate interconversion"}
{"gene.name":"uxaA","gene.annotation":"altronate hydrolase (EC 4.2.1.7)","operon.name":"uxaCA","operon.comments":"pentose and glucuronate interconversion"}
{"gene.name":"tdcA","gene.annotation":"tdcABC operon transcriptional activator","operon.name":"tdc","operon.comments":"threonine dehydratase"}
{"gene.name":"tdcB","gene.annotation":"catabolic threonine dehydratase","operon.name":"tdc","operon.comments":"threonine dehydratase"}
{"gene.name":"tdcC","gene.annotation":"threonine-serine permease","operon.name":"tdc","operon.comments":"threonine dehydratase"}
{"gene.name":"agaZ","gene.annotation":"putative tagatose 6-phosphate kinase (EC 2.7.1.-)","operon.name":"aga","operon.comments":"N-acetylgalactosamine uptake"}
{"gene.name":"agaV","gene.annotation":"N-acetylgalactosamine-specific IIB component 2","operon.name":"aga","operon.comments":"N-acetylgalactosamine uptake"}
{"gene.name":"agaW","gene.annotation":"N-acetylgalactosamine-specific IIC component 2","operon.name":"aga","operon.comments":"N-acetylgalactosamine uptake"}
{"gene.name":"agaA","gene.annotation":"putative N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.-)","operon.name":"aga","operon.comments":"N-acetylgalactosamine uptake"}
{"gene.name":"agaS","gene.annotation":"may be a tagatose-6-phsophate ketose/aldose isomerase","operon.name":"aga","operon.comments":"N-acetylgalactosamine uptake"}
{"gene.name":"agaY","gene.annotation":"tagatose-bisphosphate aldolase","operon.name":"aga","operon.comments":"N-acetylgalactosamine uptake"}
{"gene.name":"agaB","gene.annotation":"N-acetylgalactosamine-specific IIB component 1","operon.name":"aga","operon.comments":"N-acetylgalactosamine uptake"}
{"gene.name":"agaC","gene.annotation":"N-acetylgalactosamine-specific IIC component 1","operon.name":"aga","operon.comments":"N-acetylgalactosamine uptake"}
{"gene.name":"agaD","gene.annotation":"N-acetylgalactosamine-specific IID component","operon.name":"aga","operon.comments":"N-acetylgalactosamine uptake"}
{"gene.name":"agaI","gene.annotation":"putative galactosamine-6-phosphate isomerase (EC 5.3.1.-)","operon.name":"aga","operon.comments":"N-acetylgalactosamine uptake"}
{"gene.name":"rpsO","gene.annotation":"ribosomal protein S15","operon.name":"rpsO-pnp","operon.comments":"ribosomal protein"}
{"gene.name":"pnp","gene.annotation":"polynucleotide phosphorilase","operon.name":"rpsO-pnp","operon.comments":"ribosomal protein"}
{"gene.name":"Regulation","gene.annotation":"terminator","operon.name":"rpsO-pnp","operon.comments":"ribosomal protein"}
{"gene.name":"rbfA","gene.annotation":"ribosome-binding factor A; P15B","operon.name":"rbfAtruB","operon.comments":"RNA modification"}
{"gene.name":"truB","gene.annotation":"tRNA pseudouridine 55 synthase; P35","operon.name":"rbfAtruB","operon.comments":"RNA modification"}
{"gene.name":"yhbC","gene.annotation":"hypothetical 16.8 kD protein","operon.name":"nusA","operon.comments":"transcription & translation"}
{"gene.name":"nusA","gene.annotation":"NusA protein","operon.name":"nusA","operon.comments":"transcription & translation"}
{"gene.name":"infB","gene.annotation":"initiation factor IF2-alpha (infB)","operon.name":"nusA","operon.comments":"transcription & translation"}
{"gene.name":"rplU","gene.annotation":"ribosomal protein L21","operon.name":"rplUrpmA","operon.comments":"ribosomal protein"}
{"gene.name":"rpmA","gene.annotation":"ribosomal protein L27","operon.name":"rplUrpmA","operon.comments":"ribosomal protein"}
{"gene.name":"yhbN","gene.annotation":"17.3 kD protein","operon.name":"rpoN","operon.comments":"organic nitrogen uptake and assimilation"}
{"gene.name":"yhbG","gene.annotation":"probable ABC transporter in ntrA/rpoN 5region\trpoN\torganic nitrogen uptake and assimilation\nrpoN\tsigma-N (sigma-54)\trpoN\torganic nitrogen uptake and assimilation\nyhbH\tprobable sigma-54 modulation protein\trpoN\torganic nitrogen uptake and assimilation\nptsN\tenzyme IIA-Ntr; affects growth on organic nitrogen\trpoN\torganic nitrogen uptake and assimilation\n3135\to284\trpoN\torganic nitrogen uptake and assimilation\nptsO\t(npr) NPr\trpoN\torganic nitrogen uptake and assimilation\ngltB\tglutamate synthase, large subunit (EC 1.4.1.13)\tgltBDF\tinduction of the Ntr enzymes\ngltD\tglutamate synthase, small subunit (EC 1.4.1.13)\tgltBDF\tinduction of the Ntr enzymes\ngltF\tgltF protein\tgltBDF\tinduction of the Ntr enzymes\nsspA\tstringent starvation protein A\tsspAB\tstringent starvation\nsspB\tstringent starvation protein B\tsspAB\tstringent starvation\nrplM\t50S ribosomal protein L13\trplMrpsI\tribosomal protein\nrpsI\t30S ribosomal protein S9\trplMrpsI\tribosomal protein\naccB\t(fabE) biotin carboxyl carrier protein\taccBC\tacetylCoA carboxylase\naccC\t(fabG) biotin carboxylase\taccBC\tacetylCoA carboxylase\npanF\tpantothenate permease\tprmA\tribosomal protein\nprmA\tribosomal protein L11 methyltransferase\tprmA\tribosomal protein\nyhdG\thypothetical 35.9 kD protein\tfis\tDNA inversion\nfis\tbinding to a recombinational enhancer sequence that is required to stimulate hin-mediated dna inversion\tfis\tDNA inversion\nyhdJ\thypothetical adenine-specific methylase\tfis\tDNA inversion\nacrE\tacriflavine resistance protein\tacrEF\t(envCD) acriflavine resistance\nacrF\tacriflavine resistance protein\tacrEF\t(envCD) acriflavine resistance\ndef\tN-formylmethionylaminoacyl-tRNA deformylase\tdef-fmt\ttRNA modification\nfmt\tmethionyl-tRNA formyltransferase\tdef-fmt\ttRNA modification\nfmu\tSun protein (Fmu protein); nucleolar protein family\tdef-fmt\ttRNA modification\nrpsM\t30S ribosomal protein S13\talpha\tribosomal protein\nrpsK\t30S ribosomal protein Sll\talpha\tribosomal protein\nrpsD\t30S ribosomal protein S4\talpha\tribosomal protein\nrpoA\tRNA polymerase (EC 2.7.7.6), alpha subunit\talpha\tribosomal protein\nrplQ\t50S ribosomal protein L17\talpha\tribosomal protein\nrplN\t50S ribosomal protein L14\tspc\tribosomal protein\nrplX\t50S ribosomal protein L24\tspc\tribosomal protein\nrplE\t50S ribosomal protein L5\tspc\tribosomal protein\nrpsN\t30S ribosomal protein S14\tspc\tribosomal protein\nrpsH\t30S ribosomal protein S8\tspc\tribosomal protein\nrplF\t50S ribosomal protein L6\tspc\tribosomal protein\nrplR\t50S ribosomal protein L18\tspc\tribosomal protein\nrpsE\t30S ribosomal protein S5\tspc\tribosomal protein\nrpmD\t50S ribosomal protein L30\tspc\tribosomal protein\nrplO\t50S ribosomal protein L15\tspc\tribosomal protein\nprlA\t(secY) membrane protein, protein secretion (with secL)\tspc\tribosomal protein\nrpmJ\t50S ribosomal protein X\tspc\tribosomal protein\nrpsJ\t30S ribosomal protein S10\tS10\tribosomal protein\nrplC\t50S ribosomal protein L3\tS10\tribosomal protein\nrplD\t50S ribosomal protein L4\tS10\tribosomal protein\nrplW\t50S ribosomal protein L23\tS10\tribosomal protein\nrplB\t50S ribosomal protein L2\tS10\tribosomal protein\nrpsS\t50S ribosomal protein S19\tS10\tribosomal protein\nrplV\t50S ribosomal protein L22\tS10\tribosomal protein\nrpsC\t30S ribosomal protein S3\tS10\tribosomal protein\nrplP\t50S ribosomal protein L16\tS10\tribosomal protein\nrpmC\t50S ribosomal protein L29\tS10\tribosomal protein\nrpsQ\t30S ribosomal protein S17\tS10\tribosomal protein\nrpsL\t30S ribosomal protein S12\tstr\tribosomal protein\nrpsG\t30S ribosomal protein S7\tstr\tribosomal protein\nfusA\tprotein chain elongation factor EF-G\tstr\tribosomal protein\ntufA\tprotein chain elongation factor EF-Tu\tstr\tribosomal protein\nRegulation\tpoor promoter\tfic-pabA\tpara-aminobenzoate synthetase\nyhfG\thypothetical 6.6 kD protein\tfic-pabA\tpara-aminobenzoate synthetase\nfic\tcell filamentation protein fic\tfic-pabA\tpara-aminobenzoate synthetase\npabA\tpara-aminobenzoate synthetase; CoII\tfic-pabA\tpara-aminobenzoate synthetase\nnirB\tNADH-nitrate oxidoreductase apoprotein\tnirBDC\tNADH-dependent nitrite reductase\nnirD\tnitrite reductase (NAD(P)H) small subunit\tnirBDC\tNADH-dependent nitrite reductase\nnirC\tpotential nitrite transporter\tnirBDC\tNADH-dependent nitrite reductase\naroK\tshikimic acid kinase I\tdam\tdam superoperon; cell cycle regulation, aromatic amino acid biosynthesis and carbohydrate metabolism\naroB\t3-dehydroquinate synthase\tdam\tdam superoperon; cell cycle regulation, aromatic amino acid biosynthesis and carbohydrate metabolism\ndamX\t\tdam\tdam superoperon; cell cycle regulation, aromatic amino acid biosynthesis and carbohydrate metabolism\ndam\tadenine methylase\tdam\tdam superoperon; cell cycle regulation, aromatic amino acid biosynthesis and carbohydrate metabolism\nrpe\t24k; d-ribulose-5-phosphate epimerase\tdam\tdam superoperon; cell cycle regulation, aromatic amino acid biosynthesis and carbohydrate metabolism\ngph\t27k; 2-phosphoglycolate phosphatase\tdam\tdam superoperon; cell cycle regulation, aromatic amino acid biosynthesis and carbohydrate metabolism\ntrpS\ttryptophanyl-tRNA synthetase\tdam\tdam superoperon; cell cycle regulation, aromatic amino acid biosynthesis and carbohydrate metabolism\nompR\tOmpR protein; regulator\tompB\ttwo-component system\nenvZ\tEnvZ protein; sensor\tompB\ttwo-component system\nfeoA\tferrous iron transport protein a\tfeoAB\tferrous iron transpor\nfeoB\tferrous iron transport protein b\tfeoAB\tferrous iron transpor\nmalP\tmaltodextrin phosphorylase\tmalPQ\tGlycogen Debranching Enzyme System\nmalQ\t4-alpha-glucanotransferase\tmalPQ\tGlycogen Debranching Enzyme System\nglgB\t1,4-alpha-glucan branching enzyme\tglgBXCAP\tglycogen synthesis\nglgX\tglycogen operon protein GlgX\tglgBXCAP\tglycogen synthesis\nglgC\tglucose-1-phosphate adenylyltransferase\tglgBXCAP\tglycogen synthesis\nglgA\tglycogen synthase\tglgBXCAP\tglycogen synthesis\nglgP\talpha-glucan phosphorylase\tglgBXCAP\tglycogen synthesis\ngntK\tthermoresistant gluconokinase (EC 2.7.1.12)\tgntKU\tgluconate uptake and catabolism\ngntU_1\tlow-affinity gluconate transporter (gluconate permease)\tgntKU\tgluconate uptake and catabolism\ngntU_2\t\tgntKU\tgluconate uptake and catabolism\nugpB\tsn-glycerol 3-phosphate transport system; periplasmic binding protein\tugpBAECQ\tsn-glycerol 3-phosphate transport system\nugpA\tsn-glycerol 3-phosphate transport system\tugpBAECQ\tsn-glycerol 3-phosphate transport system\nugpE\tsn-glycerol 3-phosphate transport system membrane protein\tugpBAECQ\tsn-glycerol 3-phosphate transport system\nugpC\tsn-glycerol 3-phosphate transport system\tugpBAECQ\tsn-glycerol 3-phosphate transport system\nugpQ\tglycerophosphodiester phosphodiesterase, cytosolic (EC 3,1,4,46)\tugpBAECQ\tsn-glycerol 3-phosphate transport system\nlivK\tleucine-specific binding protein precursor\tlivKHMGF\thigh affinity, branched-chain amino acid transport system\nlivH\thigh-affinity branched-chain amino acid transport permease\tlivKHMGF\thigh affinity, branched-chain amino acid transport system\nlivM\thigh-affinity branched-chain amino acid transport permease\tlivKHMGF\thigh affinity, branched-chain amino acid transport system\nlivG\thigh-affinity branched-chain amino acid transport ATP-binding protein\tlivKHMGF\thigh affinity, branched-chain amino acid transport system\nlivF\thigh-affinity branched-chain amino acid transport ATP-binding protein\tlivKHMGF\thigh affinity, branched-chain amino acid transport system\nftsY\tcell division protein\tftsYEX\tcell division\nftsE\tcell division protein\tftsYEX\tcell division\nftsX\tcell division protein\tftsYEX\tcell division\nnikA\ttransport of Ni essential for hydrogenases; nickel-binding protein\tnikABCDE\tnickel transport\nnikB\tnickel transport system permease protein NikB\tnikABCDE\tnickel transport\nnikC\tnickel transport system permease protein NikC\tnikABCDE\tnickel transport\nnikD\tnickel transport ATP-binding protein NikD\tnikABCDE\tnickel transport\nnikE\tnickel transport ATP-binding protein NikE\tnikABCDE\tnickel transport\nRegulation\tpromoter\tarsBC\tarsenical resistance\narsR\tarsenical resistance operon arsEFG repressor\tarsBC\tarsenical resistance\narsB\tarsenical pump membrane protein\tarsBC\tarsenical resistance\narsC\tarsenate reductase (arsenical pump modifier)\tarsBC\tarsenical resistance\ndppA\tdipeptide-binding protein\tdpp\tdipeptide transporter\ndppB\ttransmembrane protein\tdpp\tdipeptide transporter\ndppC\ttransmembrane protein\tdpp\tdipeptide transporter\ndppD\tperipheral membrane protein\tdpp\tdipeptide transporter\ndppF\tperipheral membrane protein\tdpp\tdipeptide transporter\nglyQ\tglycine tRNA synthetase, alpha chain\tglyQS\tglycine tRNA synthetase\nglyS\tglycine tRNA synthetase, beta chain (EC 6 1 1 14)\tglyQS\tglycine tRNA synthetase\nxylF\tD-xylose-binding periplasmic protein precursor\txylFGH\txylose transport\nxylG\tD-xylose transport ATP-binding protein XylG\txylFGH\txylose transport\nxylH\txylose transport permease protein XylH\txylFGH\txylose transport\nxylR\txylose operon regulatory protein\txylFGH\txylose transport\nRegulation\tterminator\txylFGH\txylose transport\nRegulation\tpromoter\tmtlAD\tmannitol uptake\nmtlA\tmannitol-specific enzyme II of the phosphotransferase system\tmtlAD\tmannitol uptake\nmtlD\tmannitol-phosphate dehydrogenase\tmtlAD\tmannitol uptake\nlldP\t(lctP) L-lactate permease\tlct\tL-lactate dehydrogenase\nlctR\t(lldR) putative l-lactate dehydrogenase operon regulatory protein\tlct\tL-lactate dehydrogenase\nlctD\t(lldD) L-lactate dehydrogenase\tlct\tL-lactate dehydrogenase\nkbl\t2-amino-3-ketobutyrate CoA ligase; glycine acetyltransferase\ttdh\tL-threonine metabolism\ntdh\tthreonine 3-dehydrogenase\ttdh\tL-threonine metabolism\nrfaQ\tlipopolysaccharide core biosynthesis\trfa\tLipopolysaccharide core biosynthesis\nrfaG\tlipopolysaccharide core biosynthesis; glucosyltransferase 1\trfa\tLipopolysaccharide core biosynthesis\nrfaP\tlipopolysaccharide core biosynthesis; phosphorylation of core heptose\trfa\tLipopolysaccharide core biosynthesis\nrfaS\t\trfa\tLipopolysaccharide core biosynthesis\nrfaB\tUDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyl-transferase\trfa\tLipopolysaccharide core biosynthesis\nrfaI\tUDP-D-galactose:(glucosyl)lipopolysaccharide-o-1,3-D-galactosyl-transferase\trfa\tLipopolysaccharide core biosynthesis\nrfaJ\tUDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase\trfa\tLipopolysaccharide core biosynthesis\nkdtA\tKDO transferase\tkdtAB\tlipopolysaccharid biosynthesis\nkdtB\tlipopolysaccharide core biosynthesis protein kdtB\tkdtAB\tlipopolysaccharid biosynthesis\ndfp\tflavoprotein affecting synthesis of DNA and pantothenate metabolism\tdfp-dut\tDNA & pantothenate metabolism\ndut\tdeoxyuridine 5-triphosphate nucleotidohydrolase","operon.name":"dfp-dut","operon.comments":"DNA & pantothenate metabolism"}
{"gene.name":"ttk","gene.annotation":"23 kD protein","operon.name":"dfp-dut","operon.comments":"DNA & pantothenate metabolism"}
{"gene.name":"rph","gene.annotation":"ribonuclease PH (EC 2.7.7.56); removes nuc following the -CCA terminus of tRNA and adds nuc to the ends of RNA by using nucleoside diphosphates as substrate","operon.name":"rph-pyrE","operon.comments":"ribonuclease & pyrimidine biosynthesis"}
{"gene.name":"pyrE","gene.annotation":"orotate phosphoribosyltransferase","operon.name":"rph-pyrE","operon.comments":"ribonuclease & pyrimidine biosynthesis"}
{"gene.name":"Regulation","gene.annotation":"terminator","operon.name":"rph-pyrE","operon.comments":"ribonuclease & pyrimidine biosynthesis"}
{"gene.name":"Regulation","gene.annotation":"promoter","operon.name":"spoT","operon.comments":"DNA/RNA processing"}
{"gene.name":"gmk","gene.annotation":"GMP kinase","operon.name":"spoT","operon.comments":"DNA/RNA processing"}
{"gene.name":"rpoZ","gene.annotation":"DNA-directed RNA polymerase omega protein","operon.name":"spoT","operon.comments":"DNA/RNA processing"}
{"gene.name":"spoT","gene.annotation":"(p)ppGpp 3-pyrophosphohydrolase\tspoT\tDNA/RNA processing\nRegulation\tpromoter\tspoT\tDNA/RNA processing\nspoU\tputative rRNA methylases\tspoT\tDNA/RNA processing\nrecG\tDNA recombinase\tspoT\tDNA/RNA processing\nuhpA\tresponse regulator positive activator of uhpT transcription\tuhp\thexose phosphate transport\nuhpB\tsensor protein UhpB; membrane associated protein kinase\tuhp\thexose phosphate transport\nuhpC\tregulatory protein; may act jointly with the UhpB\tuhp\thexose phosphate transport\nuhpT\thexose phosphate transport protein\tuhp\thexose phosphate transport\nilvB\tacetolactate synthase I (EC 4.1.3.18), valine sensitive, large subunit\tilvBN\tacetolactate synthase I\nilvN\tacetolactate synthase I (EC 4.1.3.18), valine sensitive, small subunit\tilvBN\tacetolactate synthase I\nglvC\tPTSIIC\tglvCBG\tglucoside uptake\nglvB\tPTSIIB\tglvCBG\tglucoside uptake\nglvG\t6-phospho-beta-glucosidase\tglvCBG\tglucoside uptake\nRegulation\tpromoter\tdnaA\treplication\ndnaA\tDnaA protein\tdnaA\treplication\ndnaN\tDNA polymerase III beta-subunit\tdnaA\treplication\nrecF\trecF protein\tdnaA\treplication\nrpmH\tribosomal protein L34\trpmH\tribosomal protein\nrnpA\tribonuclease P protein component\trpmH\tribosomal protein\ntnaA\ttryptophanase\ttnaAB\ttryptophan transport\ntnaB\tlow affinity tryptophan permease\ttnaAB\ttryptophan transport\nbglG\t(bglC) positive regulation of bgl operon\tbglGFB\tbeta-glucoside transport\nbglF\tbeta-glucoside transport, PEP-dependent enzymeII (EC 2.7.1.69)\tbglGFB\tbeta-glucoside transport\nbglB\tphospho-beta-glucosidase B (EC 3.2.1.86)\tbglGFB\tbeta-glucoside transport\nglmU\tUDP-N-acetylglucosamine pyrophosphorylase\tglmUS\tamino sugar biosynthesis\nglmS\tglucosaminephosphate isomerase\tglmUS\tamino sugar biosynthesis\natpI\tmembrane-bound ATP synthase (EC 3.6.1.34), subunit?\tatp\t(unc) membrane-bound ATP synthase\natpB\tmembrane-bound ATP synthase (EC 3.6.1.34), F0 sector, subunit a\tatp\t(unc) membrane-bound ATP synthase\natpE\tmembrane-bound ATP synthase (EC 3.6.1.34), F0 sector, subunit c; DCCD-binding protein\tatp\t(unc) membrane-bound ATP synthase\natpF\tmembrane-bound ATP synthase (EC 3.6.1.34), F0 sector, subunit b\tatp\t(unc) membrane-bound ATP synthase\natpH\tmembrane-bound ATP synthase (EC 3.6.1.34), Fl sector, delta subunit\tatp\t(unc) membrane-bound ATP synthase\natpA\tmembrane-bound ATP synthase (EC 3.6.1.34), Fl sector, alpha subunit\tatp\t(unc) membrane-bound ATP synthase\natpG\tmembrane-bound ATP synthase (EC 3.6.1.34), Fl sector, gamma subunit\tatp\t(unc) membrane-bound ATP synthase\natpD\tmembrane-bound ATP synthase (EC 3.6.1.34), Fl sector, beta subunit\tatp\t(unc) membrane-bound ATP synthase\natpC\tmembrane-bound ATP synthase (EC 3.6.1.34), Fl sector, epciron subunit\tatp\t(unc) membrane-bound ATP synthase\nrbsD\tD-ribose high-affinity transport system; membrane-associated protein\trbs\tribose transport\nrbsA\tD-ribose high-affinity transport system; membrane-associated protein\trbs\tribose transport\nrbsC\tD-ribose high-affinity transport system; membrane-associated protein\trbs\tribose transport\nrbsB\tD-ribose peroplasmic binding protein\trbs\tribose transport\nrbsK\tribokinase\trbs\tribose transport\nilvG_1\tacetolactate synthase 11 (EC 4.1.3.18), valine insensitive, large subunit, silent in K-12\tilvGMEDA\tvaline and isoleucine biosynthesis\nilvM\tacetolactate synthase 11 (EC 4.1.3.18), valine insensitive, small subunit, silent in K-12\tilvGMEDA\tvaline and isoleucine biosynthesis\nilvE\tbranched-chain amino acid aminotransferase (EC 2.6.1.42)\tilvGMEDA\tvaline and isoleucine biosynthesis\nilvD\tdihydroxyacid dehydratase (EC 4.2.1.9)\tilvGMEDA\tvaline and isoleucine biosynthesis\nilvA\tthreonine deaminase (EC 4.2.1.16)\tilvGMEDA\tvaline and isoleucine biosynthesis\nhemC\tporphobilinogen deaminase\them\tporphyrin biosynthesis\nhemD\turoporphyrinogen-III cosynthetase\them\tporphyrin biosynthesis\nhemX\tputative urogenIII methylase\them\tporphyrin biosynthesis\nhemY\t\them\tporphyrin biosynthesis\nfadB\tfatty oxidation complex alpha subunit\tfadBA\tmultifunctional enzyme complex of the fatty acid degradation cycle\nfadA\tfatty oxidation complex beta subunit\tfadBA\tmultifunctional enzyme complex of the fatty acid degradation cycle\nglnA\tglutamine synthetase A\tglnALG\tglutamine synthetase\nglnL\tglutamine synthetase L; NR(II)\tglnALG\tglutamine synthetase\nglnG\tglutamine synthetase; NR(I)\tglnALG\tglutamine synthetase\nComment\tputative\tfrv\tfructose-specific enzymes\nfrvA\tPTS system, fructose-like-1 IIA component\tfrv\tfructose-specific enzymes\nfrvB\tPTS system, fructose-like-1 IIBC component\tfrv\tfructose-specific enzymes\nfrvX\t\tfrv\tfructose-specific enzymes\nrhaB\trhamnulokinase (EC 2.7.1.5)\trhaBAD\tL-rhamnose uptake\nrhaA\tL-rhamnose isomerase (EC 5.3.1.14)\trhaBAD\tL-rhamnose uptake\nrhaD\tD-ribose high-affinity transport system; membrane-associated protein\trhaBAD\tL-rhamnose uptake\ncpxR\tregulator\tcpxAR\ttwo-component system\ncpxA\tkinase\tcpxAR\ttwo-component system\nglpF\tglycerol diffusion facilitator\tglpFK\tglycerol uptake\nglpK\tglycerol kinase\tglpFK\tglycerol uptake\nmetB\tcystathione gamma-synthase\tmetBL\tmethionine biosynthesis\nmetL\taspartokinase II-homoserine dehydrogenase II\tmetBL\tmethionine biosynthesis\nRegulation\tterminator\tmetBL\tmethionine biosynthesis\nargC\tN-acetyl-gamma-glutamylphosphate reductase (EC 1,2,1,38)\targECBH\targinine biosynthesis\nargB\tacetylglutamate kinase (EC 2,7,2,8)\targECBH\targinine biosynthesis\nargH\targininosuccinate lyase (EC 4,3,2,1)\targECBH\targinine biosynthesis\nsecE\tpreprotein translocase secE subunit\tsecE-nusG\tprotein export & transcription\nnusG\ttranscription antitermination\tsecE-nusG\tprotein export & transcription\nrplK\t5OS ribosomal protein Lll\tL11\tribosomal protein\nrplA\t50S ribosomal protein Ll, regulates synthesis of Ll and Lll\tL11\tribosomal protein\nrplJ\t50S ribosomal protein L10\tbeta\tribosomal protein\nrplL\t50S ribosomal protein L7/L12\tbeta\tribosomal protein\nrpoB\tDNA-directed RNA polymerase beta chain\tbeta\tribosomal protein\nrpoC\tDNA-directed RNA polymerase beta chain","operon.name":"beta","operon.comments":"ribosomal protein"}
{"gene.name":"thiC","gene.annotation":"thiamin biosynthesis, pyrimidine moiety","operon.name":"thiCEFGH","operon.comments":"thiamin biosynthesis"}
{"gene.name":"thiE","gene.annotation":"thiamin biosynthesis, thiazole moiety","operon.name":"thiCEFGH","operon.comments":"thiamin biosynthesis"}
{"gene.name":"thiF","gene.annotation":"thiamin biosynthesis, thiazole moiety","operon.name":"thiCEFGH","operon.comments":"thiamin biosynthesis"}
{"gene.name":"thiG","gene.annotation":"thiamin biosynthesis, thiazole moiety","operon.name":"thiCEFGH","operon.comments":"thiamin biosynthesis"}
{"gene.name":"thiH","gene.annotation":"thlamin biosynthesis, thiazole moiety","operon.name":"thiCEFGH","operon.comments":"thiamin biosynthesis"}
{"gene.name":"hydH","gene.annotation":"kinase","operon.name":"hydHG","operon.comments":"two-component system"}
{"gene.name":"hydG","gene.annotation":"regurator; involved in the regulation of the labile hydrogenase activity","operon.name":"hydHG","operon.comments":"two-component system"}
{"gene.name":"purH","gene.annotation":"phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 7.1.1.3)","operon.name":"purHD","operon.comments":"purine nucleotide biosynthesis"}
{"gene.name":"purD","gene.annotation":"phosphoribosylglycinamide synthetase (EC 6.3.4.13)","operon.name":"purHD","operon.comments":"purine nucleotide biosynthesis"}
{"gene.name":"aceB","gene.annotation":"malate synthase A (EC 4.1.3.2)","operon.name":"ace","operon.comments":"malate synthase"}
{"gene.name":"aceA","gene.annotation":"isocitrate lyase (EC 4.1.3.1)","operon.name":"ace","operon.comments":"malate synthase"}
{"gene.name":"aceK","gene.annotation":"isocitrate dehydrogenase kinase/phosphatase (EC 2.7.1.116)","operon.name":"ace","operon.comments":"malate synthase"}
{"gene.name":"Regulation","gene.annotation":"promoter","operon.name":"malEFG","operon.comments":"maltodextrins and maltose transport"}
{"gene.name":"malE","gene.annotation":"periplasmic maltose-binding protein","operon.name":"malEFG","operon.comments":"maltodextrins and maltose transport"}
{"gene.name":"malF","gene.annotation":"cytoplasmic maltose-binding protein","operon.name":"malEFG","operon.comments":"maltodextrins and maltose transport"}
{"gene.name":"malG","gene.annotation":"transport of maltose and maltodextrins","operon.name":"malEFG","operon.comments":"maltodextrins and maltose transport"}
{"gene.name":"Regulation","gene.annotation":"terminator","operon.name":"malEFG","operon.comments":"maltodextrins and maltose transport"}
{"gene.name":"Regulation","gene.annotation":"promoter","operon.name":"malK-lamB","operon.comments":"maltose, malto dextrins uptake"}
{"gene.name":"malK","gene.annotation":"transport of maltose","operon.name":"malK-lamB","operon.comments":"maltose, malto dextrins uptake"}
{"gene.name":"lamB","gene.annotation":"maltose porin; phage; lambda receptor protein","operon.name":"malK-lamB","operon.comments":"maltose, malto dextrins uptake"}
{"gene.name":"malM","gene.annotation":"periplasmic protein of mal operon","operon.name":"malK-lamB","operon.comments":"maltose, malto dextrins uptake"}
{"gene.name":"ubiC","gene.annotation":"chorismate lyase","operon.name":"ubiCA","operon.comments":"ubiquinone biosynthesis"}
{"gene.name":"ubiA","gene.annotation":"4-hydroxybenzoate-octaprenyl transferase","operon.name":"ubiCA","operon.comments":"ubiquinone biosynthesis"}
{"gene.name":"nrfA","gene.annotation":"cytochrome c family heme-binding; cytochrome C552 precursor","operon.name":"nrf","operon.comments":"nitrite reduction"}
{"gene.name":"nrfB","gene.annotation":"cytochrome c family heme-binding","operon.name":"nrf","operon.comments":"nitrite reduction"}
{"gene.name":"nrfC","gene.annotation":"4Fe-4S ferredoxins","operon.name":"nrf","operon.comments":"nitrite reduction"}
{"gene.name":"nrfD","gene.annotation":"NrfD protein","operon.name":"nrf","operon.comments":"nitrite reduction"}
{"gene.name":"nrfE","gene.annotation":"cytochrome c-type biogenesis protein NrfE","operon.name":"nrf","operon.comments":"nitrite reduction"}
{"gene.name":"nrfF","gene.annotation":"cytochrome c-type biogenesis protein NrfF","operon.name":"nrf","operon.comments":"nitrite reduction"}
{"gene.name":"nrfG","gene.annotation":"NrfG protein","operon.name":"nrf","operon.comments":"nitrite reduction"}
{"gene.name":"Regulation","gene.annotation":"pho box","operon.name":"phn","operon.comments":"phosphonate utilization"}
{"gene.name":"phnC","gene.annotation":"ATP-binding protein","operon.name":"phn","operon.comments":"phosphonate utilization"}
{"gene.name":"phnD","gene.annotation":"periplasmic protein","operon.name":"phn","operon.comments":"phosphonate utilization"}
{"gene.name":"phnE","gene.annotation":"phosphonates transport system permease protein PhnE","operon.name":"phn","operon.comments":"phosphonate utilization"}
{"gene.name":"3998","gene.annotation":"","operon.name":"phn","operon.comments":"phosphonate utilization"}
{"gene.name":"phnF","gene.annotation":"PhnF protein","operon.name":"phn","operon.comments":"phosphonate utilization"}
{"gene.name":"phnG","gene.annotation":"PhnG protein","operon.name":"phn","operon.comments":"phosphonate utilization"}
{"gene.name":"phnH","gene.annotation":"PhnH protein","operon.name":"phn","operon.comments":"phosphonate utilization"}
{"gene.name":"phnI","gene.annotation":"PhnI protein","operon.name":"phn","operon.comments":"phosphonate utilization"}
{"gene.name":"phnJ","gene.annotation":"PhnJ protein","operon.name":"phn","operon.comments":"phosphonate utilization"}
{"gene.name":"phnK","gene.annotation":"ATP-binding protein","operon.name":"phn","operon.comments":"phosphonate utilization"}
{"gene.name":"phnL","gene.annotation":"ATP-binding protein","operon.name":"phn","operon.comments":"phosphonate utilization"}
{"gene.name":"phnM","gene.annotation":"HisM-like integral membrane protein PhnM","operon.name":"phn","operon.comments":"phosphonate utilization"}
{"gene.name":"phnN","gene.annotation":"ATP-binding protein","operon.name":"phn","operon.comments":"phosphonate utilization"}
{"gene.name":"phnO","gene.annotation":"PhnO protein","operon.name":"phn","operon.comments":"phosphonate utilization"}
{"gene.name":"phnP","gene.annotation":"PhnP protien","operon.name":"phn","operon.comments":"phosphonate utilization"}
{"gene.name":"phnQ","gene.annotation":"very hypothetical PhnQ protei","operon.name":"phn","operon.comments":"phosphonate utilization"}
{"gene.name":"Regulation","gene.annotation":"terminator","operon.name":"phn","operon.comments":"phosphonate utilization"}
{"gene.name":"basR","gene.annotation":"regulator","operon.name":"basRS","operon.comments":"two-component system"}
{"gene.name":"basS","gene.annotation":"kinase","operon.name":"basRS","operon.comments":"two-component system"}
{"gene.name":"melA","gene.annotation":"(aga) a-galactosidase (EC 3.2.1.22)","operon.name":"melAB","operon.comments":"melibiose uptake"}
{"gene.name":"melB","gene.annotation":"thiomethylgalactoside permease II, melibiose carrier","operon.name":"melAB","operon.comments":"melibiose uptake"}
{"gene.name":"Regulation","gene.annotation":"promoter","operon.name":"cad","operon.comments":"lysine decarboxylase"}
{"gene.name":"cadB","gene.annotation":"transport of lysine/cadaverine","operon.name":"cad","operon.comments":"lysine decarboxylase"}
{"gene.name":"cadA","gene.annotation":"lysine decarboxylase (EC 4.1.1.18)","operon.name":"cad","operon.comments":"lysine decarboxylase"}
{"gene.name":"Regulation","gene.annotation":"heat shock gene promoter","operon.name":"groE","operon.comments":"(mop) molecular chaperone"}
{"gene.name":"mopB","gene.annotation":"(groES) GroES protein","operon.name":"groE","operon.comments":"(mop) molecular chaperone"}
{"gene.name":"mopA","gene.annotation":"(groEL) GroEL protein","operon.name":"groE","operon.comments":"(mop) molecular chaperone"}
{"gene.name":"Regulation","gene.annotation":"terminator","operon.name":"groE","operon.comments":"(mop) molecular chaperone"}
{"gene.name":"frdA","gene.annotation":"fumarate reductase (EC 1.3.99.1), flavoprotein subunit","operon.name":"frd","operon.comments":"fumarate reductase"}
{"gene.name":"frdB","gene.annotation":"fumarate reductase (EC 1.3.99.1), membrane anchor polypeptide","operon.name":"frd","operon.comments":"fumarate reductase"}
{"gene.name":"frdC","gene.annotation":"fumarate reductase (EC 1.3.99.1), membrane anchor polypeptide","operon.name":"frd","operon.comments":"fumarate reductase"}
{"gene.name":"frdD","gene.annotation":"fumarate reductase (EC 1.3.99.1), membrane anchor polypeptide","operon.name":"frd","operon.comments":"fumarate reductase"}
{"gene.name":"yjeF","gene.annotation":"hypothetical 54.7 kD protein in psd-amib intergenic region","operon.name":"amiB","operon.comments":"complex operon"}
{"gene.name":"yjeE","gene.annotation":"hypothetical 16.9 kD protein in psd-amib intergenic region","operon.name":"amiB","operon.comments":"complex operon"}
{"gene.name":"amiB","gene.annotation":"n-acetylmuramoyl-l-alanine amidase precursor","operon.name":"amiB","operon.comments":"complex operon"}
{"gene.name":"mutL","gene.annotation":"DNA mismatch repair protein mutL","operon.name":"amiB","operon.comments":"complex operon"}
{"gene.name":"miaA","gene.annotation":"tRNA delta-2-isopentenylpyrophosphate (IPP) transferase","operon.name":"amiB","operon.comments":"complex operon"}
{"gene.name":"hfq","gene.annotation":"host factor-I (HF-I)","operon.name":"amiB","operon.comments":"complex operon"}
{"gene.name":"Regulation","gene.annotation":"promoter","operon.name":"hflA","operon.comments":"high frequency of lysogenization"}
{"gene.name":"hflX","gene.annotation":"putative GTPase","operon.name":"hflA","operon.comments":"high frequency of lysogenization"}
{"gene.name":"hflK","gene.annotation":"putative integral membrane protease","operon.name":"hflA","operon.comments":"high frequency of lysogenization"}
{"gene.name":"hflC","gene.annotation":"putative integral membrane protease","operon.name":"hflA","operon.comments":"high frequency of lysogenization"}
{"gene.name":"rpsF","gene.annotation":"30S ribosomal protein S6","operon.name":"rpsF-rplI","operon.comments":"ribosomal protein"}
{"gene.name":"priB","gene.annotation":"primosomal replication protein N","operon.name":"rpsF-rplI","operon.comments":"ribosomal protein"}
{"gene.name":"rpsR","gene.annotation":"30S ribosomal protein S18","operon.name":"rpsF-rplI","operon.comments":"ribosomal protein"}
{"gene.name":"rplI","gene.annotation":"SOS ribosomal protein L9","operon.name":"rpsF-rplI","operon.comments":"ribosomal protein"}
{"gene.name":"chpS","gene.annotation":"PemI-like protein 2","operon.name":"chpSB","operon.comments":"regulation of cell growth"}
{"gene.name":"chpB","gene.annotation":"PemK-like protein 2","operon.name":"chpSB","operon.comments":"regulation of cell growth"}
{"gene.name":"treB","gene.annotation":"phosphotransferase system trehalose permease","operon.name":"treBC","operon.comments":"trehalose uptake"}
{"gene.name":"treC","gene.annotation":"trehalose-6-phosphate hydrolase","operon.name":"treBC","operon.comments":"trehalose uptake"}
{"gene.name":"Regulation","gene.annotation":"promoter","operon.name":"pyrBI","operon.comments":"pyrimidine biosynthesis"}
{"gene.name":"pyrB","gene.annotation":"aspartate carbamoyltransferase (EC 2.1.3.2), catalytic subunit","operon.name":"pyrBI","operon.comments":"pyrimidine biosynthesis"}
{"gene.name":"pyrI","gene.annotation":"aspartate carbamoyltransferase (EC 2.1.3.2), regulatory subunit","operon.name":"pyrBI","operon.comments":"pyrimidine biosynthesis"}
{"gene.name":"fecA","gene.annotation":"iron(III) dicitrate transport protein FecA precursor","operon.name":"fecABCDE","operon.comments":"citrate-dependent iron(III) transport"}
{"gene.name":"fecB","gene.annotation":"","operon.name":"fecABCDE","operon.comments":"citrate-dependent iron(III) transport"}
{"gene.name":"fecC","gene.annotation":"iron(III) dicitrate transport system permease protein","operon.name":"fecABCDE","operon.comments":"citrate-dependent iron(III) transport"}
{"gene.name":"fecD","gene.annotation":"iron(III) dicitrate transport system permease protein","operon.name":"fecABCDE","operon.comments":"citrate-dependent iron(III) transport"}
{"gene.name":"fecE","gene.annotation":"iron(III) dicitrate transport ATP-binding protein","operon.name":"fecABCDE","operon.comments":"citrate-dependent iron(III) transport"}
{"gene.name":"Regulation","gene.annotation":"CAP binding site","operon.name":"uxuAB","operon.comments":"glucuronate pathway"}
{"gene.name":"Regulation","gene.annotation":"promoter","operon.name":"uxuAB","operon.comments":"glucuronate pathway"}
{"gene.name":"uxuA","gene.annotation":"mannonate dehydratase","operon.name":"uxuAB","operon.comments":"glucuronate pathway"}
{"gene.name":"uxuB","gene.annotation":"mannonate oxidoreductase","operon.name":"uxuAB","operon.comments":"glucuronate pathway"}
{"gene.name":"Regulation","gene.annotation":"promoter","operon.name":"dnaTC","operon.comments":"DNA replication"}
{"gene.name":"dnaT","gene.annotation":"primosomal protein I","operon.name":"dnaTC","operon.comments":"DNA replication"}
{"gene.name":"dnaC","gene.annotation":"DNA replication protein DnaC","operon.name":"dnaTC","operon.comments":"DNA replication"}
{"gene.name":"Regulation","gene.annotation":"promoter","operon.name":"deoAB","operon.comments":"nucleotide and deoxyribonucleotide catabolism"}
{"gene.name":"deoC","gene.annotation":"2-deoxyribose 5-phosphate aldolase","operon.name":"deoAB","operon.comments":"nucleotide and deoxyribonucleotide catabolism"}
{"gene.name":"Regulation","gene.annotation":"CRP binding sites","operon.name":"deoAB","operon.comments":"nucleotide and deoxyribonucleotide catabolism"}
{"gene.name":"Regulation","gene.annotation":"promoter","operon.name":"deoAB","operon.comments":"nucleotide and deoxyribonucleotide catabolism"}
{"gene.name":"deoA","gene.annotation":"thymidine phosphorylase (EC 2.4.2.4)","operon.name":"deoAB","operon.comments":"nucleotide and deoxyribonucleotide catabolism"}
{"gene.name":"deoB","gene.annotation":"phosphopentomutase (EC 5.4.2.7)","operon.name":"deoAB","operon.comments":"nucleotide and deoxyribonucleotide catabolism"}
{"gene.name":"deoD","gene.annotation":"purine nucleoside phosphorylase (EC 2.4.2.1)","operon.name":"deoAB","operon.comments":"nucleotide and deoxyribonucleotide catabolism"}
{"gene.name":"Regulation","gene.annotation":"terminator","operon.name":"deoAB","operon.comments":"nucleotide and deoxyribonucleotide catabolism"}
{"gene.name":"serB","gene.annotation":"phosphoserine phosphatase","operon.name":"serBsms","operon.comments":"phosphatase & DNA repair"}
{"gene.name":"sms","gene.annotation":"Sms protein","operon.name":"serBsms","operon.comments":"phosphatase & DNA repair"}
{"gene.name":"creA","gene.annotation":"","operon.name":"creABCD","operon.comments":"phosphate sensor"}
{"gene.name":"creB","gene.annotation":"member of the two-component regulatory system CreC/CreB","operon.name":"creABCD","operon.comments":"phosphate sensor"}
{"gene.name":"creC","gene.annotation":"phoM; protein kinase","operon.name":"creABCD","operon.comments":"phosphate sensor"}
{"gene.name":"creD","gene.annotation":"inner membrane protein CreD","operon.name":"creABCD","operon.comments":"phosphate sensor"}