NEWS
drawProteins 4.0.0
- Changing tests based on an updated version of ggplot2 to 3.5.0 which changes
the length of the ggplot object.
ARGUMENT
- Replace size with linewidth in function draw_chain() following a
depreciation in ggplot.
drawProteins 1.31.1
- Changing tests based on an updated version of ggplot2 to
drawProteins 1.9.0
- Default addition of chain where it is absent.
drawProteins 1.1.1
FEATURES
- New function called draw_folding(). This function allows the drawing
of the STRAND, HELIX and TURN types which denote regions of the proteins
that assemble as beta-strands, alpha helicies or make a turn in the 3D
structure of the protein.
- New function called parse_gff(). This function imports files or urls
that link to a GFF3 format and parses the data to allow it to be plotted.
drawProteins 0.99.10
ARGUMENT
- show.legend added as argument to allow the option to show or not show
the legend as per ggplot2.
drawProteins 0.99.9
FEATURES
- New function called draw_recept_dom(). This function allows the drawing
of the TOPO_DOM and TRANSMEM types of receptors. Data from TNFR1 and CD40
are included to demonstate the function.
drawProteins 0.99.8
FEATURES
- New function called extact_transcripts. This function will ammend the
data frame to allow each chain from the same UniProt accession number to
to drawn separately. A vignette entitled drawProteins_extract_transcripts
has been written to demonstrate.
- LazyData is now false and NAMESPACE updated as per Bioconductor review.
drawProteins 0.98.3
FEATURES
- New function called draw_canvas. This function was previously within
draw_chains but has now been pulled out to allow the generation of a canvas
separately from the chains. It did require quite a rewrite but I think
it will make things more useful For example, it will allow the plotting of
domains without chains which has the potential to be very useful.
drawProteins 0.98.2
FEATURES
- Rename functions from geom to draw. E.g geom_chains is now geom_draw.
This is because they weren't really geoms and using the word draw seem
more helpful and a better reflection of the function.
drawProteins 0.98.1
FEATURES
- Drawing protein schematics from Uniprot database with Accession numbers