To cite doubletrouble in publications, use:

Almeida-Silva F, Van de Peer Y doubletrouble: an R/Bioconductor package for the identification, classification, and analysis of gene and genome duplications. Bioinformatics, 41(2), btaf043. (2025). https://doi.org/10.1093/bioinformatics/btaf043

Corresponding BibTeX entry:

  @Article{,
    title = {doubletrouble: an R/Bioconductor package for the
      identification, classification, and analysis of gene and genome
      duplications},
    author = {Fabricio Almeida-Silva and Yves {Van de Peer}},
    journal = {Bioinformatics},
    year = {2025},
    volume = {41},
    number = {2},
    pages = {btaf043},
    url =
      {https://academic.oup.com/bioinformatics/article/41/2/btaf043/7979242},
    doi = {10.1093/bioinformatics/btaf043},
  }