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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "doppelgangR" in publications use:'
type: software
title: 'doppelgangR: Identify likely duplicate samples from genomic or meta-data'
version: 1.33.0
doi: 10.1093/jnci/djw146
abstract: The main function is doppelgangR(), which takes as minimal input a list
  of ExpressionSet object, and searches all list pairs for duplicated samples. The
  search is based on the genomic data (exprs(eset)), phenotype/clinical data (pData(eset)),
  and "smoking guns" - supposedly unique identifiers found in pData(eset).
authors:
- family-names: Waldron
  given-names: Levi
  email: lwaldron.research@gmail.com
- family-names: Reister
  given-names: Markus
  email: markus.riester@novartis.com
preferred-citation:
  type: article
  title: 'The Doppelganger Effect: Hidden Duplicates in Databases of Transcriptome
    Profiles'
  authors:
  - family-names: Waldron
    given-names: Levi
    email: lwaldron.research@gmail.com
  - family-names: Riester
    given-names: Markus
  - family-names: Ramos
    given-names: Marcel
  - family-names: Parmigiani
    given-names: Giovanni
  - family-names: Birrer
    given-names: Michael
  year: '2016'
  volume: '108'
  doi: 10.1093/jnci/djw146
  journal: Journal of the National Cancer Institute
  start: djw146
repository: https://bioc.r-universe.dev
repository-code: https://github.com/lwaldron/doppelgangR
url: https://github.com/lwaldron/doppelgangR
contact:
- family-names: Waldron
  given-names: Levi
  email: lwaldron.research@gmail.com