Package 'derfinderData'

Title: Processed BigWigs from BrainSpan for examples
Description: Processed 22 samples from BrainSpan keeping only the information for chromosome 21. Data is stored in the BigWig format and is used for examples in other packages.
Authors: Leonardo Collado-Torres [aut, cre] (ORCID: <https://orcid.org/0000-0003-2140-308X>), Andrew Jaffe [aut] (ORCID: <https://orcid.org/0000-0001-6886-1454>), Jeffrey Leek [aut, ths] (ORCID: <https://orcid.org/0000-0002-2873-2671>)
Maintainer: Leonardo Collado-Torres <[email protected]>
License: Artistic-2.0
Version: 2.31.0
Built: 2026-10-10 10:34:11 UTC
Source: https://github.com/bioc/derfinderData

Help Index

BrainSpan phenotype information

Description

Information for 24 samples from the BrainSpan project covering two structure types with 6 fetal and 6 adult samples per structure type.

Format

A data.frame with 7 columns:

gender

The gender of the individual sequenced.

lab

The label for the sample.

Age

The age in years of the individual sequenced.

structure_acronym

The structure acronym for the sequenced sample.

structure_name

The name of the structure sequenced.

file

The URL to the original BigWig file with data for all chromosomes.

groupe

Whether the individual is considered a fetal or adult sample.

References

  1. BrainSpan: Atlas of the Developing Human Brain. Funded by ARRA Awards 1RC2MH089921-01, 1RC2MH090047-01, and 1RC2MH089929-01. 2011. Available from: http://developinghumanbrain.org.

  2. See http://brainspan.org/policies.html#terms_of_use