NEWS


derfinder 1.21.7

BUG FIXES

derfinder 1.21.5

SIGNIFICANT USER-VISIBLE CHANGES

BUG FIXES

derfinder 1.21.2

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 1.21.1

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 1.19.9

BUG FIXES

derfinder 1.19.8

derfinder 1.19.4

BUG FIXES

sampleFile <- c('SRR387777' = 'http://duffel.rail.bio/recount/SRP009615/bw/SRR387777.bw')
regs <- GenomicRanges::GRanges('chrY', IRanges(start = c(1, 1), width = 10), strand = '-')
names(regs) <- c(1:2)
result <- rtracklayer::import(sampleFile, selection = regs, as = 'RleList')

This error affected recount and other reverse dependencies that use derfinder for processing BigWig files.

derfinder 1.19.2

BUG FIXES

derfinder 1.17.3

NEW FEATURES

derfinder 1.17.2

BUG FIXES

derfinder 1.15.4

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 1.15.2

BUG FIXES

derfinder 1.15.1

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 1.13.8

BUG FIXES

derfinder 1.13.1

NEW FEATURES

derfinder 1.11.8

BUG FIXES

derfinder 1.11.7

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 1.11.4

BUG FIXES

derfinder 1.11.2

BUG FIXES

derfinder 1.9.6

BUG FIXES

derfinder 1.9.3

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 1.9.2

BUG FIXES

derfinder 1.7.16

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 1.7.14

NEW FEATURES

derfinder 1.7.12

BUG FIXES

derfinder 1.7.2

BUG FIXES

derfinder 1.7.1

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 1.5.39

BUG FIXES

derfinder 1.5.37

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 1.5.27

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 1.5.13

BUG FIXES

derfinder 1.5.11

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 1.5.9

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 1.5.8

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 1.5.7

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 1.5.6

NEW FEATURES

derfinder 1.3.3

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 1.3.2

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 1.3.1

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 1.1.18

BUG FIXES

derfinder 1.1.17

SIGNIFICANT USER-VISIBLE CHANGES

BUG FIXES

derfinder 1.1.16

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 1.1.15

BUG FIXES

derfinder 1.1.14

BUG FIXES

derfinder 1.1.5

NEW FEATURES

BUG FIXES

derfinder 1.1.3

NEW FEATURES

BUG FIXES

derfinder 0.99.0

NEW FEATURES

derfinder 0.0.81

NEW FEATURES

derfinder 0.0.80

NEW FEATURES

derfinder 0.0.79

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.78

NEW FEATURES

derfinder 0.0.77

NEW FEATURES

Special care has to be taken in order to guarantee that the coverage is the same as some reads might be discarded if the region is too narrow. See the advanced argument protectWhich in loadCoverage() for more information. Also, if totalMapped and targetSize were used prior to filtering, they should be used again.

derfinder 0.0.76

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.75

SIGNIFICANT USER-VISIBLE CHANGES

BUG FIXES

derfinder 0.0.74

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.71

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.70

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.69

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.67

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.66

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.65

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.64

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.63

NEW FEATURES

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.62

NEW FEATURES

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.61

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.60

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.59

NEW FEATURES

derfinder 0.0.58

NEW FEATURES

derfinder 0.0.57

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.56

NEW FEATURES

SIGNIFICANT USER-VISIBLE CHANGES

BUG FIXES

derfinder 0.0.55

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.54

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.53

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.52

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.51

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.50

BUG FIXES

derfinder 0.0.49

BUG FIXES

derfinder 0.0.48

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.47

SIGNIFICANT USER-VISIBLE CHANGES

BUG FIXES

derfinder 0.0.46

SIGNIFICANT USER-VISIBLE CHANGES

BUG FIXES

derfinder 0.0.44

SIGNIFICANT USER-VISIBLE CHANGES

BUG FIXES

derfinder 0.0.42

SIGNIFICANT USER-VISIBLE CHANGES

BUG FIXES

derfinder 0.0.41

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.40

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.39

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.38

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.37

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.36

NEW FEATURES

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.35

BUG FIXES

derfinder 0.0.34

BUG FIXES

derfinder 0.0.33

BUG FIXES

derfinder 0.0.32

BUG FIXES

derfinder 0.0.31

BUG FIXES

derfinder 0.0.30

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.29

SIGNIFICANT USER-VISIBLE CHANGES

BUG FIXES

derfinder 0.0.28

NEW FEATURES

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.26

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.25

SIGNIFICANT USER-VISIBLE CHANGES

BUG FIXES

derfinder 0.0.24

BUG FIXES

derfinder 0.0.23

BUG FIXES

derfinder 0.0.22

SIGNIFICANT USER-VISIBLE CHANGES

BUG FIXES

derfinder 0.0.21

NEW FEATURES

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.20

NEW FEATURES

derfinder 0.0.19

NEW FEATURES

derfinder 0.0.18

NEW FEATURES

derfinder 0.0.17

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.16

NEW FEATURES

BUG FIXES

derfinder 0.0.15

SIGNIFICANT USER-VISIBLE CHANGES

BUG FIXES

derfinder 0.0.14

NEW FEATURES

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.13

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.12

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.11

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.10

SIGNIFICANT USER-VISIBLE CHANGES

BUG FIXES

derfinder 0.0.9

SIGNIFICANT USER-VISIBLE CHANGES

BUG FIXES

derfinder 0.0.8

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.7

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.6

NEW FEATURES

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.5

NEW FEATURES

BUG FIXES

derfinder 0.0.4

NEW FEATURES

derfinder 0.0.3

NEW FEATURES

derfinder 0.0.2

NEW FEATURES

derfinder 0.0.1

NEW FEATURES

SIGNIFICANT USER-VISIBLE CHANGES

derfinder 0.0.0

NEW FEATURES