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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "demuxmix" in publications use:'
type: software
license: Artistic-2.0
title: 'demuxmix: Demultiplexing oligo-barcoded scRNA-seq data using regression mixture
  models'
version: 1.7.0
doi: 10.1093/bioinformatics/btad481
identifiers:
- type: doi
  value: 10.32614/CRAN.package.demuxmix
abstract: A package for demultiplexing single-cell sequencing experiments of pooled
  cells labeled with barcode oligonucleotides. The package implements methods to fit
  regression mixture models for a probabilistic classification of cells, including
  multiplet detection. Demultiplexing error rates can be estimated, and methods for
  quality control are provided.
authors:
- family-names: Klein
  given-names: Hans-Ulrich
  email: hansulrich.klein@gmail.com
  orcid: https://orcid.org/0000-0002-6382-9428
preferred-citation:
  type: article
  title: 'demuxmix: demultiplexing oligonucleotide-barcoded single-cell RNA sequencing
    data with regression mixture models'
  authors:
  - family-names: Klein
    given-names: Hans-Ulrich
    email: hansulrich.klein@gmail.com
    orcid: https://orcid.org/0000-0002-6382-9428
  journal: Bioinformatics
  year: '2023'
  volume: '39'
  issue: '8'
  doi: 10.1093/bioinformatics/btad481
  start: btad481
repository: https://bioc.r-universe.dev
repository-code: https://github.com/huklein/demuxmix
commit: f35ec72c4a91ccd88e29a0be9560d6d8f788580d
url: https://github.com/huklein/demuxmix
date-released: '2024-01-29'
contact:
- family-names: Klein
  given-names: Hans-Ulrich
  email: hansulrich.klein@gmail.com
  orcid: https://orcid.org/0000-0002-6382-9428