# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "decontam" in publications use:'
type: software
license: Artistic-2.0
title: 'decontam: Identify Contaminants in Marker-gene and Metagenomics Sequencing
  Data'
version: 1.25.0
doi: 10.1101/221499
abstract: Simple statistical identification of contaminating sequence features in
  marker-gene or metagenomics data. Works on any kind of feature derived from environmental
  sequencing data (e.g. ASVs, OTUs, taxonomic groups, MAGs,...). Requires DNA quantitation
  data or sequenced negative control samples.
authors:
- family-names: Callahan
  given-names: Benjamin
  email: benjamin.j.callahan@gmail.com
- family-names: Davis
  given-names: Nicole Marie
preferred-citation:
  type: article
  title: Simple statistical identification and removal of contaminant sequences in
    marker-gene and metagenomics data
  authors:
  - family-names: Davis
    given-names: Nicole M
  - family-names: Proctor
    given-names: Diana
  - family-names: Holmes
    given-names: Susan P
  - family-names: Relman
    given-names: David A
  - family-names: Callahan
    given-names: Benjamin J
  journal: bioRxiv
  year: '2017'
  doi: 10.1101/221499
  start: '221499'
repository: https://bioc.r-universe.dev
repository-code: https://github.com/benjjneb/decontam
url: https://github.com/benjjneb/decontam
date-released: '2021-02-19'
contact:
- family-names: Callahan
  given-names: Benjamin
  email: benjamin.j.callahan@gmail.com