# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "decompTumor2Sig" in publications use:'
type: software
license: GPL-2.0-only
title: 'decompTumor2Sig: Decomposition of individual tumors into mutational signatures
  by signature refitting'
version: 2.21.0
identifiers:
- type: doi
  value: 10.32614/CRAN.package.decompTumor2Sig
abstract: Uses quadratic programming for signature refitting, i.e., to decompose the
  mutation catalog from an individual tumor sample into a set of given mutational
  signatures (either Alexandrov-model signatures or Shiraishi-model signatures), computing
  weights that reflect the contributions of the signatures to the mutation load of
  the tumor.
authors:
- family-names: Piro
  given-names: Rosario M.
  email: rmpiro@gmail.com
preferred-citation:
  type: article
  title: 'decompTumor2Sig: Identification of mutational signatures active in individual
    tumors'
  authors:
  - family-names: Kr"uger
    given-names: Sandra
  - family-names: Piro
    given-names: Rosario M.
    email: rmpiro@gmail.com
  volume: '20'
  issue: Suppl 4
  year: '2019'
  journal: BMC Bioinformatics
  start: '152'
repository: https://bioc.r-universe.dev
repository-code: https://github.com/rmpiro/decompTumor2Sig
commit: 559c87fa41be4adaccb6e8abd910df74da7e08b2
url: http://rmpiro.net/decompTumor2Sig/
date-released: '2022-05-09'
contact:
- family-names: Piro
  given-names: Rosario M.
  email: rmpiro@gmail.com
references:
- type: article
  title: Identification of mutational signatures active in individual tumors
  authors:
  - family-names: Kr"uger
    given-names: Sandra
  - family-names: Piro
    given-names: Rosario M.
  journal: PeerJ Preprints
  volume: '5'
  year: '2017'
  start: e3257v1
- type: manual
  title: 'decompTumor2Sig: Decompose individual tumors to mutational signatures'
  authors:
  - family-names: Kr"uger
    given-names: Sandra
  - family-names: Piro
    given-names: Rosario M.
  year: '2022'
  notes: R package version 2.21.0