NEWS

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debrowser 1.12.2

• Bar bax plot name fix

debrowser 1.10.7

• Better error reporting in data upload
• Better error reporting condition selection using metadata
• alldetected genes matrix downlad fixed in QC section

debrowser 1.10.1

• LRT made default in DESeq2.
• Labels in main plots changed.

debrowser 1.9.21

• Last publication fixes

debrowser 1.8.6

• The columns that have strings removed while loading
• Labels can be changed in the main plots
• Plot Information box added to give more information about the plots.

debrowser 1.8.4

• Calculated padj and foldchange columns added to all detected genes result
• Normalization issue is fixed in comparison table

debrowser 1.8.3

• EdgeR and Limma

debrowser 1.8.2

• Package installation changed to warning
• Dependancies removed from DESCRIPTION to suppress loading messages
• Biarxiv citation added

debrowser 1.8.1

• Interactive heatmap height and width fix
• DEBrowser turned to a modular structure. The modules can be used in other shiny applications.
• More interactivity added to Heatmaps and main plots.
• Lasso selection is added to main plots

debrowser 1.6.6

• HTML Header fixed
• A more generic file import tool that senses string columns developed

debrowser 1.5.4

• heatmap redblue fix

debrowser 1.5.3

• Figure caption fix
• Menu fix

debrowser 1.5.2

• img path build fix

debrowser 1.3.12

• pca menu fix

debrowser 1.3.11

• heatmap column fix

debrowser 1.3.10

• addDataCols NAMESPACE fix

debrowser 1.3.9

• heatmap pdf fix

debrowser 1.2.6

• css change

debrowser 1.2.5

• main plot x, y axis fix

debrowser 1.2.4

• pcaset top percentile list fix

debrowser 1.2.3

• Scatter plot bug fixes
• Variation Bar plot order fix

debrowser 1.2.2

• Bug fixes

debrowser 1.2.1

• PCA Bug fixes
• Bach effect correction fixes

debrowser 1.1.11

• Bug fixes

debrowser 1.1.10

• Normalization method selection added to main plots and tables too
• Batch effect correction

debrowser 1.1.9

• edgeR and d3heatmap dependancy fix
• undocumented functions fix

debrowser 1.1.8

• Various bug fixes
• Data preperation is reachable from everywhere

debrowser 1.1.7

• Limma, EdgeR and DESeq2 support
• Interactive Heatmap
• Interactive PCA
• IQR and Density plots