Changes in version 1.45.1                        

    o   update email address.

                       Changes in version 1.35.1                        

    o   Update uniprot rest api.

                       Changes in version 1.29.1                        

    o   add citation.

                       Changes in version 1.27.9                        

    o   update the hyperlink of p.adjust.methods in documentation.

                       Changes in version 1.27.8                        

    o   add adjust p-value for testDAU function.

                       Changes in version 1.27.7                        

    o   optimize the label position of markers for logo.

                       Changes in version 1.27.6                        

    o   add markers for logo.

                       Changes in version 1.27.5                        

    o   allow multiple species for prepareProteome.

                       Changes in version 1.27.3                        

    o   fix the typo in dagLogo documentation.

                       Changes in version 1.27.2                        

    o   add availableSchemes function.

    o   fix the x-axis.

                       Changes in version 1.27.1                        

    o   adjust the Depends, Imports and Suggests packages

                       Changes in version 1.23.5                        

    o   add dontrun for prepareProteomeByFTP in case there is net connection issue.

                       Changes in version 1.23.4                        

    o   return errors when type of getSequence is not correct.

                       Changes in version 1.23.3                        

    o   Update documentation.

                       Changes in version 1.23.1                        

    o   Add function prepareProteomeByFTP

    o   fix the bug in addScheme

                       Changes in version 1.21.4                        

    o   Fix the bug if there are multiple position in one peptides for fetchSequence.

                       Changes in version 1.21.3                        

    o   Update to grImport2

                       Changes in version 1.21.2                        

    o   merge the change by Haibo.

                       Changes in version 1.21.1                        

    o   documentation generated by RoxygenNote.

    o   add function cleanPeptides.

                       Changes in version 1.17.2                        

    o   Fix the bug for formatSequence.R when seq is not character.

                       Changes in version 1.17.1                        

    o   add .globals environment.

                        Changes in version 1.9.3                        

    o   To catch the error when biomaRt server does not response correctly in 
	documentations.

                        Changes in version 1.9.2                        

    o   change fetchSequence to accept sequences.

                        Changes in version 1.9.1                        

    o   update the test to testthat

                        Changes in version 1.7.2                        

NEW FEATURES

    o   add html documentation

    o   customize the x axis as the amino acid physical position

    o   update the documentation

BUG FIXES

    o   No changes classified as 'bug fixes' (package under active
	development)

                        Changes in version 1.7.1                        

NEW FEATURES

    o   No changes classified as 'new features' (package under active
	development)

BUG FIXES

    o   better layout of the sequence logo.

                        Changes in version 1.5.1                        

NEW FEATURES

    o   No changes classified as 'new features' (package under active
	development)

BUG FIXES

    o   try to catch the error when mart server does not work.

                        Changes in version 1.3.6                        

NEW FEATURES

    o   add test files for fetchSequence function

BUG FIXES

    o   No changes classified as 'bug fixes' (package under active
	development)

                        Changes in version 1.3.4                        

NEW FEATURES

    o   No changes classified as 'bug fixes' (package under active
	development)

BUG FIXES

    o   fetchSequences(): when using proteome object created from AAStringSet, 
	the columns 2 and 3 in the sequences data frame do not contain the expected 
	values.

    o   testDAU(): the counts() function returned NA for letters that were missing 
	in a given matrix; that lead to NaNs in the background matrix and to errors 
	during dagLogo() plotting. changed counts() to return 0 for missing letters.

    o   fix the typo in dagLogo()

                        Changes in version 1.3.3                        

NEW FEATURES

    o   add background Noise into test

    o   column label relative to the anchor when draw logos

BUG FIXES

    o   No changes classified as 'bug fixes' (package under active
	development)