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# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "curatedOvarianData" in publications use:'
type: software
license: Artistic-2.0
title: 'curatedOvarianData: Clinically Annotated Data for the Ovarian Cancer Transcriptome'
version: 1.51.5
doi: 10.1093/database/bat013
identifiers:
- type: doi
  value: 10.32614/CRAN.package.curatedOvarianData
abstract: Manually curated human ovarian cancer ExpressionSet objects from 30 studies,
  with uniformly processed expression data and standardized clinical metadata including
  survival outcomes. Datasets are hosted on Zenodo and downloaded on first use, then
  cached locally with BiocFileCache. Includes a configurable script for rule-based
  creation of filtered dataset lists for meta-analysis.
authors:
- family-names: Ganzfried
  given-names: Benjamin
- family-names: Riester
  given-names: Markus
- family-names: Skates
  given-names: Steve
- family-names: Wang
  given-names: Victoria
- family-names: Risch
  given-names: Thomas
- family-names: Haibe-Kains
  given-names: Benjamin
- family-names: Tyekucheva
  given-names: Svitlana
- family-names: Ding
  given-names: Jie
- family-names: Jazic
  given-names: Ina
- family-names: Birrer
  given-names: Michael
- family-names: Parmigiani
  given-names: Giovanni
- family-names: Huttenhower
  given-names: Curtis
- family-names: Waldron
  given-names: Levi
  email: lwaldron.research@gmail.com
  orcid: https://orcid.org/0000-0003-2725-0694
preferred-citation:
  type: article
  title: 'curatedOvarianData: Clinically Annotated Data for the Ovarian Cancer Transcriptome'
  authors:
  - family-names: Ganzfried
    given-names: Benjamin Frederick
  - family-names: Riester
    given-names: Markus
  - family-names: Haibe-Kains
    given-names: Benjamin
  - family-names: Risch
    given-names: Thomas
  - family-names: Tyekucheva
    given-names: Svitlana
  - family-names: Jazic
    given-names: Ina
  - family-names: Wang
    given-names: Xin Victoria
  - family-names: Ahmadifar
    given-names: Mahnaz
  - family-names: Birrer
    given-names: Michael
  - family-names: Parmigiani
    given-names: Giovanni
  - family-names: Huttenhower
    given-names: Curtis
  - family-names: Waldron
    given-names: Levi
    email: lwaldron.research@gmail.com
    orcid: https://orcid.org/0000-0003-2725-0694
  journal: Database
  volume: '2013'
  year: '2013'
  doi: 10.1093/database/bat013
  url: https://academic.oup.com/database/article/doi/10.1093/database/bat013/379438
repository: https://bioc.r-universe.dev
repository-code: https://github.com/waldronlab/curatedOvarianData
commit: 9fe91924836da9da26686136741a4bfe6e4551bb
url: https://github.com/waldronlab/curatedOvarianData
date-released: '2026-10-03'
contact:
- family-names: Waldron
  given-names: Levi
  email: lwaldron.research@gmail.com
  orcid: https://orcid.org/0000-0003-2725-0694