Package: curatedCRCData
Type: Package
Title: Colorectal Cancer Gene Expression Analysis
Version: 2.45.6
Date: 2026-10-03
Authors@R: c(
    person("Princy", "Parsana", role = "aut"),
    person("Markus", "Riester", role = "aut"),
    person("Curtis", "Huttenhower", role = "aut"),
    person("Levi", "Waldron", email = "lwaldron.research@gmail.com", role = c("aut", "cre"), comment = c(ORCID = "0000-0003-2725-0694")),
    person("National Cancer Institute", role = "fnd", comment = "5U24CA180996")
  )
Description: Manually curated human colorectal cancer ExpressionSet
        objects from 34 studies, with uniformly processed expression
        data and standardized clinical metadata including survival
        outcomes. Datasets are hosted on Zenodo and downloaded on first
        use, then cached locally with BiocFileCache. Includes a
        configurable script for rule-based creation of filtered dataset
        lists for meta-analysis.
Depends: R (>= 4.5.0), Biobase
Imports: BiocFileCache, tools, utils
Suggests: survival, testthat (>= 3.0.0), metafor, genefilter, logging,
        sva, xtable, futile.logger, BiocStyle, knitr, rmarkdown
VignetteBuilder: knitr
License: Artistic-2.0
biocViews: ExperimentData, ExpressionData, CancerData, ColonCancerData,
        MicroarrayData, RNASeqData, GEO
URL: https://github.com/waldronlab/curatedCRCData
BugReports: https://github.com/waldronlab/curatedCRCData/issues
BuildResaveData: no
Config/testthat/edition: 3
Config/pak/sysreqs: libicu-dev libssl-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-10-06 16:15:35 UTC
RemoteUrl: https://github.com/bioc/curatedCRCData
RemoteRef: HEAD
RemoteSha: b01815bb50af1f1c3f27d970c84fb8eec90b59f0
NeedsCompilation: no
Packaged: 2026-11-01 08:55:26 UTC; root
Author: Princy Parsana [aut],
  Markus Riester [aut],
  Curtis Huttenhower [aut],
  Levi Waldron [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-2725-0694>),
  National Cancer Institute [fnd] (5U24CA180996)
Maintainer: Levi Waldron <lwaldron.research@gmail.com>