Package: csawUsersGuide
Version: 1.29.0
Date: 2020-11-25
Title: csaw User's Guide
Authors@R: person("Aaron", "Lun", role=c("aut", "cre"), email =
    "infinite.monkeys.with.keyboards@gmail.com")
Suggests: knitr, BiocStyle, BiocManager
biocViews: Workflow, EpigeneticsWorkflow
Description: A user's guide for the csaw package for detecting
        differentially bound regions in ChIP-seq data. Describes how to
        read in BAM files to obtain a per-window count matrix,
        filtering to obtain high-abundance windows of interest,
        normalization of sample-specific biases, testing for
        differential binding, consolidation of per-window results to
        obtain per-region statistics, and annotation and visualization
        of the DB results.
License: GPL-3
VignetteBuilder: knitr
Workflow: true
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:43:28 UTC
RemoteUrl: https://github.com/bioc/csawUsersGuide
RemoteRef: HEAD
RemoteSha: 1a71265c4b06aad547b4c15c4608f975d422c033
NeedsCompilation: no
Packaged: 2026-10-07 14:21:17 UTC; root
Author: Aaron Lun [aut, cre]
Maintainer: Aaron Lun <infinite.monkeys.with.keyboards@gmail.com>